Job Description P07623 Confidence 72.75% Date Thu Jan 5 11:00:22 GMT 2012 Rank 70 Aligned Residues 112 % Identity 11% Template c3er6D_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:putative transcriptional regulator protein; PDBTitle: crystal structure of a putative transcriptional regulator2 protein from vibrio parahaemolyticus Resolution 1.90 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.													.	.
Query SS confidence																.	.	.	.													.	.
Query Sequence		R	P	L	K	V	L	I	L	N	L	M	P	K	K	.	.	.	.	I	E	T	E	N	Q	F	L	R	L	L	S	.	.	N	S	P	L	Q	V	D	I	Q	L	L	R	I	D	S	R	E	S	R	N	T	P	A	E	H	L	N	N	F	Y	C	N	F	E	D	I	Q	D	Q	N	F	D	G	L	I	V	T	G
Query Conservation																.	.	.	.													.	.
Alig confidence										.						.	.	.	.													.	.																													.
Template Conservation										.																																																				.
Template Sequence		K	N	L	R	V	V	A	L	.	A	P	T	G	R	Y	F	A	S	I	I	S	S	L	E	I	L	E	T	A	A	E	F	A	E	F	Q	G	F	M	T	H	V	V	T	P	N	N	R	P	L	I	G	R	G	G	I	S	V	Q	P	.	T	A	Q	W	Q	S	F	D	F	T	N	I	L	I	I	G	S	I	G
Template Known Secondary structure										.				T	T	S																		T	T											T	T	S						T	T	S						.	S	S		G	G	G		S			S								S
Template Predicted Secondary structure										.																																																				.
Template SS confidence
		7	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	L	G	L	V	E	F	N	D	V	A	Y	W	P	Q	I	K	Q	V	L	E	W	S	K	D	H	V	T	S	T	L	F	V	C	W	A	V	Q	A	A	L	N	I
Query Conservation
Alig confidence												.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		D	P	L	E	S	L	D	K	I	D	.	.	.	.	P	A	L	F	D	W	I	R	E	L	H	L	K	G	S	K	I	V	A	I	D	T	G	I	F	V	V	A	K	A
Template Known Secondary structure							G	G	G	S		.	.	.	.													T	T							T	T
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.					.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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