Job Description P07623 Confidence 99.61% Date Thu Jan 5 11:00:22 GMT 2012 Rank 23 Aligned Residues 176 % Identity 18% Template c2issF_ PDB info PDB header:lyase, transferase Chain: F: PDB Molecule:glutamine amidotransferase subunit pdxt; PDBTitle: structure of the plp synthase holoenzyme from thermotoga maritima Resolution 2.90 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	V	L	I	L	N	L	M	P	K	K	I	E	T	E	N	Q	F	L	R	L	L	S	N	S	P	L	Q	V	D	I	Q	L	L	R	I	D	S	R	E	S	R	N	T	P	A	E	H	L	N	N	F	Y	C	N	F	E	D	I	Q	D	Q	N	F	D	G	L	I	V	T	G	A	P	L	G	L	V	E	F
Query Conservation
Alig confidence																	.									.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																	.									.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		M	K	I	G	V	L	G	V	Q	G	D	V	R	E	H	.	V	E	A	L	H	K	L	G	.	.	.	.	.	V	E	T	L	I	V	K	L	P	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	M	V	D	G	L	I	L	P	G	G	.	.	E	S	T	T	M
Template Known Secondary structure									S	S	S						.							T	T	.	.	.	.	.								S	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G		S						S	S	.	.
Template Predicted Secondary structure																	.									.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.						.	.	.	.	.	.	30	.	.	.	.																						.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		N	D	V	A	Y	W	P	Q	I	K	Q	V	L	E	W	S	K	D	H	V	T	S	T	L	F	V	C	W	A	V	Q	A	A	L	N	I	L	Y	G	I	P	K	Q	T	R	T	E	K	L	S	G	.	.	.	.	V	Y	E	H	H	I	L	H	P	H	A	L	L	T	R	G	F	D	D	S	F	L	A	P	H
Query Conservation																																																					.	.	.	.
Alig confidence																																									.												.	.	.	.																								.	.
Template Conservation																																									.																																							.	.
Template Sequence		I	R	I	L	K	E	M	D	M	D	E	K	L	V	E	R	I	N	N	G	L	P	V	F	A	T	C	A	G	V	I	L	L	A	K	R	I	K	Q	.	E	K	L	G	V	L	D	I	T	V	E	R	N	A	Y	G	R	Q	V	E	S	F	E	T	F	V	E	I	P	A	V	G	K	D	P	F	R	A	.	.
Template Known Secondary structure								T	T											T	T							T													.												T	T	T	T		S	G	G	G									G	G	G		S	S					.	.
Template Predicted Secondary structure																																									.																																							.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	Y	A	D	F	P	A	A	L	I	R	D	Y	T	D	L	E	I	L	A	E	T	E	E	G	D	A	Y	L	F	A	S	K	D	K	R	I	A	F	V	T	G	H	P	E	Y	D	A	Q	T	L	A	Q	E	F	F
Query Conservation
Alig confidence		.	.																									.	.	.
Template Conservation		.	.																									.	.	.
Template Sequence		.	.	I	F	I	R	A	P	R	I	V	E	T	G	K	N	V	E	I	L	A	T	Y	D	Y	D	.	.	.	P	V	L	V	K	E	G	N	I	L	A	C	T	F	H	P	E	L	T	D	D	L	R	L	H	R	Y	F
Template Known Secondary structure		.	.			S	S									S	S								T	T		.	.	.							T	T					S	S		G	G	G	S	S
Template Predicted Secondary structure		.	.																									.	.	.
Template SS confidence
				132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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