Job Description P07623 Confidence 99.36% Date Thu Jan 5 11:00:22 GMT 2012 Rank 36 Aligned Residues 133 % Identity 14% Template c2ad5B_ PDB info PDB header:ligase Chain: B: PDB Molecule:ctp synthase; PDBTitle: mechanisms of feedback regulation and drug resistance of ctp2 synthetases: structure of the e. coli ctps/ctp complex at 2.8-3 angstrom resolution. Resolution 2.80 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	F	D	G	L	I	V	T	G	A	P	L	G	L	V	E	F	N	D	V	A	Y	W	P	Q	I	K	Q	V	L	E	W	S	K	D	H	V	T	S	T	L	F	V	C	W	A	V	Q	A	A	L	N	I	L	Y	G	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.
Template Sequence		K	G	L	D	A	I	L	V	P	G	G	F	G	Y	.	.	.	.	.	.	.	R	G	V	E	G	M	I	T	T	A	R	F	A	R	E	N	N	I	P	Y	L	G	I	C	L	G	M	Q	V	A	L	I	D	Y	A	R	H	V	A	N	M	E	N	A	N	S	T	E	F	V	P	D	C	K	Y	P	V	V	A
Template Known Secondary structure		T	T		S										S	.	.	.	.	.	.	.	T	T														T	T							T														T	T			T	T			B	T	T	T		T	T		S			S
Template Predicted Secondary structure																.	.	.	.	.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.								.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
											157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																							.											.	.															.
Query SS confidence		.	.	.	.	.	.	.	.	.																																							.											.	.															.
Query Sequence		.	.	.	.	.	.	.	.	.	K	Q	T	R	T	E	K	L	S	G	V	Y	E	H	H	I	L	H	P	H	A	L	L	T	R	G	F	D	D	S	F	L	A	P	H	S	R	Y	.	A	D	F	P	A	A	L	I	R	D	.	.	Y	T	D	L	E	I	L	A	E	T	E	E	G	D	.	A	Y	L	F	A
Query Conservation		.	.	.	.	.	.	.	.	.																																							.											.	.															.
Alig confidence		.	.	.	.	.	.	.	.	.																	.																						.											.	.															.
Template Conservation																											.
Template Sequence		L	I	T	E	W	R	D	E	N	G	N	V	E	V	T	M	R	L	G	A	Q	Q	C	Q	L	.	V	D	D	S	L	V	R	Q	L	Y	N	A	P	T	I	V	E	R	H	R	H	R	Y	E	V	N	N	M	L	L	K	Q	I	E	D	A	G	L	R	V	A	G	R	S	G	D	D	Q	L	V	E	I	I	E
Template Known Secondary structure			T	T	T				S	S	S																.		T	T								T	S	S														G	G	G								T								T	T	T	T
Template Predicted Secondary structure																											.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
		224	.	.	.	.	.	230		.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		S	K	D	K	R	I	A	.	F	V	T	G	H	P	E	Y
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		V	P	N	H	P	W	F	V	A	C	Q	F	H	P	E	F
Template Known Secondary structure			T	T	S	S	S					S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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