Job Description P0AE12 Confidence 19.73% Date Wed Jan 25 15:20:29 GMT 2012 Rank 77 Aligned Residues 148 % Identity 17% Template c3m6wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rrna methylase; PDBTitle: multi-site-specific 16s rrna methyltransferase rsmf from thermus2 thermophilus in space group p21212 in complex with s-adenosyl-l-3 methionine Resolution 1.30 Å

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		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	G	N	W	I	T	A	E	T	E	A	P	E	E	A	I	S	D	L	A	W	K	K	H	Q	M	P	A	W	H	L	I	T	A	D	G	Q	G	I	T	L	V	N	I	G	V	G	P	S	N	A	K	T	I	C	D	H	L	A	V	L	R	P	D	V	W	L	M	I	G	H	C	G	G	L	R	E	S	Q
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	E	R	V	L	D	L	A	A	A	P	G	G	K	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	A	A	R	M	G	G	K	G	L	L	L	A	N	E	V	D	G	K	R	V	R	G	L	L	E	N	V	E	R	W	G	A	P	L	A	V	T	Q	A	P	P	R	A	L	A	E	A	F
Template Known Secondary structure		T	T						S	S		T	T						.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T		S							S																								S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.														.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		314	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330						.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure					.															.	.	.	.	.
Query SS confidence					.															.	.	.	.	.
Query Sequence		A	I	G	.	D	Y	V	L	A	H	A	Y	L	R	D	D	H	V	.	.	.	.	.	L	D	A	V	L	P	P	D	I	P	I	P	S	I	A	E	V	Q	R	A	L	Y	D	A	T	K	L	V	S	G	R	P	G	E	E	V	K	Q	R	L	R	T	G	T	V	V	T	T	D	D	R	N	W	E	L	R	Y
Query Conservation					.															.	.	.	.	.
Alig confidence					.															.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.
Template Sequence		G	T	Y	F	H	R	V	L	L	D	A	P	C	S	G	E	G	M	F	R	K	D	R	E	A	A	R	H	W	G	P	S	A	P	K	R	M	A	E	V	Q	K	A	L	L	A	Q	A	S	R	L	L	G	P	G	G	V	.	.	.	.	.	.	.	.	.	L	V	Y	S	T	C	T	F	A	P	E	E	N	E
Template Known Secondary structure			S														G	G	G	T	T	T		T	T	S	G	G	G			T	T																		T	T							.	.	.	.	.	.	.	.	.						S				G	G	G	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.										.	.	.	.	.	230	.	.	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	S	A	L	R	F	N	L	S	R	A	V	A	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	V	A	H	F	L	K	A	H	P	E	F	R	L	E
Template Known Secondary structure												T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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