Job Description P0AE12 Confidence 100.00% Date Wed Jan 25 15:20:29 GMT 2012 Rank 8 Aligned Residues 191 % Identity 18% Template c3bjeA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nucleoside phosphorylase, putative; PDBTitle: crystal structure of trypanosoma brucei nucleoside phosphorylase shows2 uridine phosphorylase activity Resolution 1.44 Å

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		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.																													.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	D	G	Q	G	I	T	L	V	N	I	G	V	G	P	S	N	A	K	T	I	C	D	H	L	A	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	D	V	W	L	M	I	G	H	C	G	G	L	R	E	S	Q	A	I	G	D	Y
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	Y	K	G	T	P	V	T	V	I	S	T	G	M	G	V	D	N	I	E	I	V	L	N	E	I	H	A	L	K	E	Y	D	M	E	R	G	Q	W	R	H	R	K	G	D	A	D	A	P	S	A	G	P	F	F	D	P	S	T	M	K	I	I	R	L	G	T	C	G	S	P	A	E	S	V	P	P	L	A	L
Template Known Secondary structure				T	T										S	S																			T	T	T	T				B		T	T		T	T	S		T	T			B			G	G	G														T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.																										.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query Sequence		V	L	A	H	A	Y	L	R	D	D	H	V	L	D	A	V	L	P	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	I	P	S	I	A	E	V	Q	R	A	L	Y	D	A	T	K	L	V	S	G	R	P	G	E	E	V	K	.	Q	R	L	R	T
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation
Template Sequence		A	V	T	R	H	A	I	G	M	D	N	T	S	L	Y	Y	S	A	G	T	R	E	T	S	K	D	Q	Q	E	I	R	R	I	V	R	E	Q	T	G	L	R	A	I	D	I	Y	T	S	M	A	H	P	N	I	T	K	S	I	C	A	A	C	D	A	H	N	A	A	T	G	S	E	A	D	K	Q	Q	Y	V	I
Template Known Secondary structure											S		G	G	G	G	G	T	T	T	T	S																	S	G	G	G	G	S																									T				G	G	G
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.																					.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	V	V	T	T	D	D	R	N	W	E	L	R	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	A	L	R	F	N	L	S	R	A	V	A	I	D	M	E	S	A	T	I	A	A	Q	G	Y	R	F	R	V	P	Y	G	T	L	L	C	V	S	D	K	P	L	H
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	T	A	T	A	S	G	F	Y	G	C	Q	G	R	R	V	G	R	F	M	K	H	L	T	V	P	N	M	V	E	E	L	G	S	L	K	F	N	L	S	N	G	V	E	V	V	T	N	I	E	M	E	T	S	A	I	C	Y	L	S	D	M	L	G	Y	Q	A	G	A	A	C	V	V	V	S	K	R	V	G
Template Known Secondary structure								S	S	S	S	G	G	G	T				G	G	G	G	G	G		S	S	T	T													T	T										S	S												T													S	S	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	I	K	L	P	G	Q	A	N	R	F	Y	E	G	A	I	S	E	H	L	Q	I	G	I	R	A	I
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		E	K	K	M	.	.	.	F	L	G	D	Q	L	D	A	A	M	K	R	C	I	K	I	I	L	E	A	L
Template Known Secondary structure		T				.	.	.			T
Template Predicted Secondary structure						.	.	.
Template SS confidence
		314	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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