Job Description P0AE12 Confidence 99.97% Date Wed Jan 25 15:20:29 GMT 2012 Rank 24 Aligned Residues 183 % Identity 20% Template c2h8gA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:5'-methylthioadenosine nucleosidase; PDBTitle: 5'-methylthioadenosine nucleosidase from arabidopsis2 thaliana Resolution 1.50 Å

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		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.										280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																.																			.																	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.																.																			.																	.	.
Query Sequence		W	H	L	I	T	A	D	G	Q	G	I	T	L	V	N	I	G	.	.	.	.	.	.	.	.	.	V	G	P	S	N	A	K	T	I	C	D	H	L	A	V	.	L	R	P	D	V	W	L	M	I	G	H	C	G	G	L	R	E	S	.	Q	A	I	G	D	Y	V	L	A	H	A	Y	L	R	D	D	.	.	H
Query Conservation																			.	.	.	.	.	.	.	.	.																.																			.																	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																.																			.																	.	.
Template Conservation
Template Sequence		L	Y	H	G	V	H	K	D	L	R	I	N	V	V	C	P	G	R	D	A	A	L	G	I	D	S	V	G	T	V	P	A	S	L	I	T	F	A	S	I	Q	A	L	K	P	D	I	I	I	N	A	G	T	C	G	G	F	K	V	K	G	A	N	I	G	D	V	F	L	V	S	D	V	V	F	H	D	R	R	I
Template Known Secondary structure								T	T										B		T	T	T		S	B			S																		S												G	G	G	T			T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	D	A	V	L	P	P	D	I	P	I	P	S	I	A	E	V	Q	R	A	L	Y	D	A	T	K	L	V	S	G	R	P	G	E	E	V	K	Q	R	L	R	T	G	T	V	V	T	T	D	D	R	N	W	E	L	R	Y	S	A	S	A	L	R	F	N	L	S	R	A	V	A	I	D	M	E	S	A	T	I
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		P	I	P	M	F	D	L	Y	G	V	G	L	R	Q	A	F	S	T	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	K	E	L	N	L	K	I	G	R	L	S	T	G	D	S	L	D	.	.	.	M	S	T	Q	D	E	T	L	I	I	A	N	D	A	T	L	K	D	M	E	G	A	A	V
Template Known Secondary structure			S	T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																S		S	S	.	.	.												T	T		S				S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.															.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Q	G	Y	R	F	R	V	P	Y	G	T	L	L	C	V	S	D	K	P	L	H	G	E	I	K	L	P	G	Q	A	N	R	F	Y	E	G	A	I	S	E	H	L	Q	I	G	I	R	A	I	D	L	L
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		A	Y	V	A	D	L	L	K	I	P	V	V	F	L	K	A	V	T	D	L	.	V	D	G	D	K	P	T	A	E	E	F	L	Q	N	L	T	V	V	T	A	A	L	E	G	T	A	T	K	V	I	N	F	I
Template Known Secondary structure								T	T													.	T	T	S	S	S
Template Predicted Secondary structure																						.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions