Job Description P0AE12 Confidence 99.86% Date Wed Jan 25 15:20:29 GMT 2012 Rank 27 Aligned Residues 201 % Identity 15% Template c1wtaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:5'-methylthioadenosine phosphorylase; PDBTitle: crystal structure of 5'-deoxy-5'-methylthioadenosine from aeropyrum2 pernix (r32 form) Resolution 1.78 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		267	.	.	270	.	.	.	.	.	.	.		.	.	280	.							.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.					.	.	.	.	.	.
Query SS confidence													.					.	.	.	.	.	.
Query Sequence		T	A	D	G	Q	G	I	T	L	V	N	.	I	G	V	G	.	.	.	.	.	.	P	S	N	A	K	T	I	C	D	H	L	A	V	L	R	P	D	V	W	L	M	I	G	H	C	G	G	L	R	E	S	Q	A	I	G	D	Y	V	L	A	H	A	Y	L	R	D	D	H	V	L	D	A	V	L	P	P	D	I
Query Conservation													.					.	.	.	.	.	.
Alig confidence													.					.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	A	G	V	K	V	A	F	L	P	R	H	G	R	G	H	R	I	P	P	H	A	I	N	Y	R	A	N	I	W	A	L	K	A	L	G	V	K	W	V	I	S	V	S	A	V	G	S	L	R	E	D	Y	R	P	G	D	F	V	V	P	D	Q	F	I	D	M	T	K	N	R	R	H	Y	T	F	Y	D	G
Template Known Secondary structure				T	T								T	T	T	T	T	T		S		G	G	G														T													S	S	T	T	S		T	T																S		S		S			S
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.				.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure																																				.	.	.																							.
Query SS confidence																																				.	.	.																							.
Query Sequence		P	I	P	S	I	A	E	V	Q	R	A	L	Y	D	A	T	K	L	V	S	G	R	P	G	E	E	V	K	Q	R	L	R	T	G	.	.	.	T	V	V	T	T	D	D	R	N	W	E	L	R	Y	S	A	S	A	L	R	F	N	.	L	S	R	A	V	A	I	D	M	E	S	A	T	I	A	A	Q	G	Y	R
Query Conservation																																				.	.	.																							.
Alig confidence																																				.	.	.									.	.	.	.											.
Template Conservation																																															.	.	.	.
Template Sequence		P	V	T	V	H	V	S	M	A	D	P	F	C	E	D	L	R	Q	R	L	I	D	S	G	R	R	L	G	Y	T	V	H	E	R	G	T	Y	V	C	I	E	G	P	R	F	.	.	.	.	S	T	R	A	E	S	R	V	W	K	D	V	F	K	A	D	I	I	G	M	T	L	V	P	E	I	N	L	A	C	E
Template Known Secondary structure		S	S		B					S	S		S																T					S										S	S		.	.	.	.												T	S			S				S	S
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		F	R	V	P	Y	G	T	L	L	C	V	S	D	K	.	P	L	H	G	E	I	K	L	P	G	Q	A	N	R	F	Y	E	G	A	I	S	E	H	L	Q	I	G	I	R	A	I	D	L	L	R	A	E	G	D	R	L	H
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		A	Q	L	C	Y	A	T	L	A	M	V	T	D	Y	D	V	W	A	D	R	P	V	T	A	E	E	V	E	R	V	M	I	S	N	V	E	R	A	R	R	M	L	Y	D	V	I	P	K	L	A	G	E	P	E	L	E	R
Template Known Secondary structure		T	T													T	T	S	S	S	S																										G	G	G		S	S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions