Job Description P0AEU7 Confidence 39.47% Date Wed Jan 25 15:20:31 GMT 2012 Rank 15 Aligned Residues 97 % Identity 6% Template d1gs9a_ SCOP info Four-helical up-and-down bundle Apolipoprotein Apolipoprotein Resolution 1.7

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	Q	V	A	Q	K	T	G	V	S	N	T	L	E	N	E	F	K	G	R	A	S	E	L	Q	R	M	E	T	D	L	Q	A	K	M	K	K	L	Q	S	M	K	A	G	S	D	R	T	K	L	E	K	D	V	M	A	Q	R	Q	T	F	A	Q	K	A	Q	A	F	E	Q	D	R	A	R	R	S	N	E	E
Query Conservation
Alig confidence																																																					.
Template Conservation																																																					.
Template Sequence		L	L	S	S	Q	V	T	Q	E	L	R	A	L	M	D	E	T	M	K	E	L	K	A	Y	K	S	E	L	E	E	Q	L	T	P	V	A	E	E	T	R	A	R	L	S	K	E	L	Q	A	A	Q	.	A	R	L	G	A	D	M	E	D	V	R	G	R	L	V	Q	Y	R	G	E	V	Q	A	M	L	G	Q	S
Template Known Secondary structure				S	S																									T	T	S						S															.																							T	S	T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	K	L	V	T	R	I	Q	T	A	V	K	S	V	A	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	E	L	R	V	R	L	A	S	H	L	R	K	L	R	K	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions