Job Description P0AEU7 Confidence 7.02% Date Wed Jan 25 15:20:31 GMT 2012 Rank 91 Aligned Residues 80 % Identity 13% Template c3onjA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:t-snare vti1; PDBTitle: crystal structure of yeast vti1p_habc domain Resolution 1.92 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		F	K	G	R	A	S	E	L	Q	R	M	E	T	D	L	Q	A	K	M	K	K	L	Q	S	M	K	A	G	S	D	R	T	K	L	E	K	D	V	M	A	Q	R	Q	T	F	A	Q	K	A	Q	A	F	E	Q	D	R	A	R	R	.	.	S	N	E	E	R	G	K	L	V	T	R	I	Q	T	A	V	K	S	V
Query Conservation																																																													.	.
Alig confidence																								.																																					.	.
Template Conservation																								.
Template Sequence		L	I	S	Y	E	S	D	F	K	T	T	L	E	Q	A	K	A	S	L	A	E	A	.	P	S	Q	P	L	S	Q	R	N	T	T	L	K	H	V	E	Q	Q	Q	D	E	L	F	D	L	L	D	Q	M	D	V	E	V	N	N	S	I	G	D	A	S	E	R	A	T	Y	K	A	K	L	R	E	W	K	K	T	I
Template Known Secondary structure																							G	.	G	G	S
Template Predicted Secondary structure																								.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		128	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		84	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions