Job Description P0A7K6 Confidence 43.97% Date Thu Jan 5 11:05:50 GMT 2012 Rank 20 Aligned Residues 56 % Identity 27% Template c3p8bB_ PDB info PDB header:transferase/transcription Chain: B: PDB Molecule:transcription antitermination protein nusg; PDBTitle: x-ray crystal structure of pyrococcus furiosus transcription2 elongation factor spt4/5 Resolution 1.80 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	D	V	P	S	F	R	P	G	D	T	V	E	V	K	V	W	V	V	E	G	S	K	K	R	L	Q	A	F	E	G	V	V	I	A	I	R	N	R	G	L	H	S	A	F	T	V	R	K	I	S	N	G	E	G	V	E	R	V	F	Q	T	H	S
Query Conservation
Alig confidence																	.	.	.	.					.	.	.																.	.
Template Conservation																	.	.	.	.					.	.	.																.	.
Template Sequence		K	P	A	V	S	G	L	E	P	G	D	L	V	E	V	.	.	.	.	I	A	G	P	.	.	.	F	K	G	Q	K	A	K	V	V	K	I	D	E	S	K	.	.	D	E	V	V	V	Q	F	I	D	A	I	V	P	I	P	V	T	I	K	G	D	Y
Template Known Secondary structure		S		T	T	T	T			T	T						.	.	.	.		S	S	T	.	.	.	T	T	T										T	T	T	.	.	T							S	S		S	S								G	G	G
Template Predicted Secondary structure																	.	.	.	.					.	.	.																.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions