Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7K6
Confidence68.46%DateThu Jan 5 11:05:50 GMT 2012
Rank9Aligned Residues51
% Identity29%Templatec2kvqG_
PDB info PDB header:transcriptionChain: G: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of nuse:nusg-ctd complex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70..
Predicted Secondary structure 
























Query SS confidence 

























































Query Sequence  QDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVER
Query Conservation    

 
  

 
 
   
 

 
 
 
 
 



     

  




 
  





Alig confidence 













....



...
































Template Conservation 

   
  

 
 
....  

...
 
  
 
  
   
 

 
 
  


 
 


Template Sequence  RPKTLFEPGEMVRV. . . . NDGP. . . FADFNGVVEEVDYEKSRLKVSVSIFGRATPVEL
Template Known Secondary structure 






TT....
SST...TTTTTTTTT
Template Predicted Secondary structure 









....

...











Template SS confidence 

























































   123......130...... ...140 .........150.........160.........170...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions