Job Description P0A7K6 Confidence 41.77% Date Thu Jan 5 11:05:50 GMT 2012 Rank 21 Aligned Residues 65 % Identity 26% Template c1m1gB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription antitermination protein nusg; PDBTitle: crystal structure of aquifex aeolicus n-utilization2 substance g (nusg), space group p2(1) Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	I	K	Q	L	E	Q	E	Q	M	K	Q	D	V	P	S	F	R	P	G	D	T	V	E	V	K	V	W	V	V	E	G	S	K	K	R	L	Q	A	F	E	G	V	V	I	A	I	R	N	R	G	L	H	S	A	F	T	V	R	K	I	S	N	G	E	G	V	E	R	V	F
Query Conservation
Alig confidence																												.	.	.	.					.	.	.
Template Conservation																												.	.	.	.					.	.	.
Template Sequence		Q	N	I	L	N	Q	I	K	R	G	V	K	P	S	K	V	E	F	E	K	G	D	Q	V	R	V	.	.	.	.	I	E	G	P	.	.	.	F	M	N	F	T	G	T	V	E	E	V	H	P	E	K	R	K	L	T	V	M	I	S	I	F	G	R	M	T	P	V	E	L	D	F
Template Known Secondary structure						T	T	T	S	S	S							S			T	T						.	.	.	.		S	S	T	.	.	.	T	T	T							S			T	T	S	S									T	T									G
Template Predicted Secondary structure																												.	.	.	.					.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.				.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions