|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | R | L | I | V | G | I | S | G | A | S | G | A | I | Y | G | V | R | L | L | Q | V | L | R | D | V | T | D | I | E | T | H | L | V | M | S | Q | A | A | R | Q | T | L | S | L | E | T | D | F | S | L | R | E | V | Q | A | L | A | D | V | T | H | D | A | R | D | I | A | A | S | I | S | S | G | S | F | Q | T | L | G |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|   |
|
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|
|
|   |
|
|   | . | . | . | . |   |   |
|   |   |
|   |   |   | . |
|   |   |
|   |
|   |   |
|   |   |   | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
Template Sequence |   |
K | S | V | L | M | L | G | S | G | F | V | T | R | . |
. |
. |
. |
P | T | L | D | V | L | T | D | S | . |
G | I | K | V | T | V | A | C | R | T | L | E | . |
. |
. |
. |
. |
. |
. |
S | A | K | K | L | S | A | G | V | Q | H | S | T | P | I | S | L | D | V | N | D | D | A | A | L | D | A | E | V | A | K | H | D | L |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| S | T | T |  |  | . | . | . | . |  |  |  |  |  |  |  | T | T | . | T |
|  |  |  |  |  |  | S |
|  |  | . | . | . | . | . | . | . |  |  |  |  |  |  | T | T |
| T | T |  |  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |  |  | T | T | S | S |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |
|
|  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | |
|
|
|
. | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | V | I | L | P | C | S | I | K | T | L | S | G | I | V | H | S | Y | T | D | G | L | L | T | R | A | A | D | V | V | L | K | E | R | R | P | L | V | L | C | V | R | E | T | P | L | H | L | G | H | L | R | L | M | T | Q | A | A | E | I | G | A | V | I | M | P | P | V | P | A | F | Y | H | R | P | Q | S | L | D | D |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   | . |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
V | I | S | L | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | Y | T | F | H | A | T | V | I | K | S | A | I | R | Q | K | K | H | V | V | T | . |
. |
. |
T | S | Y | V | S | P | A | M | M | E | L | D | Q | A | A | K | D | A | G | I | T | V | . |
M | N | E | I | G | Y | S | A | M | A | K | L | V | G | V |
Template Known Secondary structure |   |
 |  |  |
| S | . | . | . | . | . | . | . | . | . | . | . | . | . |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |
| . | . | . | S | S |
|
|
|  |  |  |  |  | T |  |  |  |  |  |  | T | T |
|  |  | . |  |
| S |
|
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
72 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
  |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | N | Q | T | V | N | R | V | L | D |
Query Conservation |   |
  |   |   |   |   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
P | C | A | V | A | V | K | F | V | L | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
402 | . | . | . | . | . | . | . | 410 | . | . |
  |