 |
Job Description | P0AG03 | Confidence | 22.59% | Date | Thu Jan 5 11:27:43 GMT 2012 |
Rank | 275 | Aligned Residues | 73 |
% Identity | 21% | Template | c3qfeB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:putative dihydrodipicolinate synthase family protein; |
PDBTitle: crystal structures of a putative dihydrodipicolinate synthase family2 protein from coccidioides immitis
|
Resolution | 2.35 Å |
|
 |
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | R | A | A | D | V | V | L | K | E | R | R | P | L | V | L | C | V | R | E | T | P | L | H | L | G | H | L | R | L | M | T | Q | A | A | E | I | G | A | V | I | M | P | P | V | P | A | F | Y | H | R | P | Q | S | L | D | D | V | I | N | Q | T | V | N | R | V | L | D | Q | F | A | I | T | L | P | E | D | L | F |
Query Conservation |   |
|
|
|
|
|   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |   | . |
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |
|   |   |
|   |   |   |   |   | . | . | . |   |   |
|   |   |   |   |   | . |   |
|
|   |   |   |   |   | . | . |
|
|   |
|
|
Template Sequence |   |
L | I | A | T | A | R | K | A | V | G | P | D | F | P | I | M | A | G | V | G | A | H | S | T | R | Q | V | . |
L | E | H | I | N | D | A | S | V | A | G | A | N | Y | V | L | V | L | P | P | A | Y | T | T | P | . |
. |
. |
P | V | I | K | S | F | F | D | . |
D | V | S | C | Q | S | P | L | . |
. |
P | V | V | I | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |
|
|
| S | S |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
|
|
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
| S | S | . | . |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
|
|
. | . | . | 120 | . | . | . | . | |
. | . | . | . | . | 130 | . | . | |
|
. | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|