Job Description P0AG03 Confidence 54.11% Date Thu Jan 5 11:27:43 GMT 2012 Rank 131 Aligned Residues 123 % Identity 17% Template c2dzdB_ PDB info PDB header:ligase Chain: B: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of the biotin carboxylase domain of2 pyruvate carboxylase Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	R	L	I	V	G	I	S	G	A	S	G	A	I	Y	G	V	R	L	L	Q	V	L	R	D	V	T	D	I	E	T	H	L	V	M	S	Q	A	A	R	Q	T	L	S	L	E	T	D	F	S	L	R	E	V	Q	A	L	A	D	V	T	H	D	A	R	D	I	A	A	S	I	S	S	G	S	F	Q	T	L
Query Conservation
Alig confidence																.	.	.	.										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	K	V	L	V	A	N	R	G	E	I	A	I	.	.	.	.	R	V	F	R	A	C	T	E	L	.	G	I	R	T	V	A	I	Y	S	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	G	S	Y	H	R	Y	K	A	D
Template Known Secondary structure			S													.	.	.	.									T	.	T									G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G		G	G	G	G	G	S	S
Template Predicted Secondary structure																.	.	.	.										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.																															40	.	.	.	.	.	.	.	.	.	50
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	M	V	I	L	P	C	S	I	K	T	L	S	G	I	V	H	S	Y	T	D	G	L	L	T	R	A	A	D	V	V	L	K	E	R	R	P	L	V	L	C	V	R	E	T	P	L	H	L	G	H	L	R	L	M	T	Q	A	A	E	I	G	A	V	I	M	P	P	V	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																					.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.																					.	.
Template Sequence		E	A	Y	L	V	G	E	G	K	K	P	I	E	A	Y	L	D	I	.	.	.	.	.	.	E	G	I	I	E	I	A	K	A	H	D	V	D	A	I	H	P	G	Y	G	.	.	F	L	S	E	N	I	Q	F	A	K	R	C	R	E	E	G	I	I	F	I	G	P	N	E	N	H	L	D	M	F	G	D	K	V
Template Known Secondary structure							S	T	T	S						T	T			.	.	.	.	.	.										T	T								S	S	.	.	S	S	T	T											T	T				S	S										T	S
Template Predicted Secondary structure																				.	.	.	.	.	.																					.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
																150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	F	Y	H	R	P	Q	S	L	D	D	V	I	N	Q	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	R	H	A	A	V	N	A	G	I	P	V	I	P	G	S	D	G	P	V	D	G	L	E	D	V	V	A	F	A
Template Known Secondary structure									T	T	T			B			B		S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions