Job Description P0AG03 Confidence 20.48% Date Thu Jan 5 11:27:43 GMT 2012 Rank 289 Aligned Residues 150 % Identity 13% Template c2axqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:saccharopine dehydrogenase; PDBTitle: apo histidine-tagged saccharopine dehydrogenase (l-glu2 forming) from saccharomyces cerevisiae Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	L	I	V	G	I	S	G	A	S	G	A	I	Y	G	V	R	L	L	Q	V	L	R	D	V	T	D	I	E	T	H	L	V	M	S	Q	A	A	R	Q	T	L	S	L	E	T	D	F	S	L	R	E	V	Q	A	L	A	D	V	T	H	D	A	R	D	I	A	A	S	I	S	S	G	S	F	Q	T	L	G
Query Conservation
Alig confidence														.	.	.	.																.											.	.	.																											.	.	.	.
Template Conservation														.	.	.	.																.											.	.	.																											.	.	.	.
Template Sequence		K	N	V	L	L	L	G	S	G	F	V	A	.	.	.	.	Q	P	V	I	D	T	L	A	A	N	D	D	I	N	V	.	T	V	A	C	R	T	L	A	N	A	.	.	.	Q	A	L	A	K	P	S	G	S	K	A	I	S	L	D	V	T	D	D	S	A	L	D	K	V	L	.	.	.	.	A	D	N	D	V
Template Known Secondary structure										S	T	T		.	.	.	.									T	S	T	T				.					S	S					.	.	.					G	G	G	T								T	T										.	.	.	.		T	S	S
Template Predicted Secondary structure														.	.	.	.																.											.	.	.																											.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.					.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		M	V	I	L	P	C	S	I	K	T	L	S	G	I	V	H	S	Y	T	D	G	L	L	T	R	A	A	D	V	V	L	K	E	R	R	P	L	V	L	C	V	R	E	T	P	L	H	L	G	H	L	R	L	M	T	Q	A	A	E	I	G	A	V	I	M	P	P	V	.	.	.	P	A	F	Y	H	R	P	Q	S
Query Conservation																																																																						.	.	.
Alig confidence					.	.						.	.	.	.	.	.	.	.	.	.	.																			.	.	.																											.	.	.			.	.	.	.	.	.	.
Template Conservation					.	.						.	.	.	.	.	.	.	.	.	.	.																			.	.	.																																.	.	.	.	.	.	.
Template Sequence		V	I	S	.	.	L	I	P	Y	T	.	.	.	.	.	.	.	.	.	.	.	F	H	P	N	V	V	K	S	A	I	R	T	K	T	D	V	V	T	.	.	.	S	S	Y	I	S	P	A	L	R	E	L	E	P	E	I	V	K	A	G	I	T	V	M	N	E	I	G	L	D	P	G	.	.	.	.	.	.	.
Template Known Secondary structure					.	.		S		G	G	.	.	.	.	.	.	.	.	.	.	.	G												T						.	.	.		S																	T						S		B	B	T	T	B	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.						.	.	.	.	.	.	.	.	.	.	.																			.	.	.																																.	.	.	.	.	.	.
Template SS confidence
		71	.	.			.	.	.	.	.												.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	D	V	I	N	Q	T	V	N	R	V	L	D	Q	F	A	I	T	L	P	E	D	L	F	A	R	W	Q	G
Query Conservation
Alig confidence																				.	.
Template Conservation																				.	.
Template Sequence		I	D	H	L	Y	A	V	K	T	I	D	E	V	H	R	A	G	G	.	.	K	L	K	S	F	L	S	Y	C	G
Template Known Secondary structure																	T	T		.	.
Template Predicted Secondary structure																				.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions