Job Description P0AG03 Confidence 51.25% Date Thu Jan 5 11:27:43 GMT 2012 Rank 142 Aligned Residues 122 % Identity 21% Template c1r0lD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: 1-deoxy-d-xylulose 5-phosphate reductoisomerase from2 zymomonas mobilis in complex with nadph Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.		.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.																						.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	L	.	I	V	G	I	S	G	A	S	G	A	I	Y	G	V	R	L	L	Q	V	L	R	D	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	E	T	H	L	V	M	S	Q	A	A	R	Q	T	L	S	L	E	T	D	F	S	L	R	E	V	Q	A	L	A
Query Conservation					.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.												.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		R	T	V	T	V	L	G	A	T	G	S	I	G	H	S	.	T	L	D	L	I	E	R	N	L	D	R	Y	Q	V	I	A	L	T	A	N	R	N	V	K	D	L	A	D	A	A	K	R	T	N	A	K	R	A	V	I	A	D	P	S	L	Y	N	D	L	K	E	A	L	A	G	S	S	V	E	A	A	A	G	A
Template Known Secondary structure								T	T	T	S						.								T	T	T	T									S	S													T		S					S		G	G	G								T	T	T		S						S
Template Predicted Secondary structure																	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	T	H	D	A	R	D	I	A	A	S	I	S	S	G	S	F	Q	T	L	G	M	V	I	L	P	C	S	I	K	T	L	S	G	I	V	H	S	Y	T	D	G	L	L	T	R	A	A	D	V	V	L	K	E	R	R	P	L	V	L	C	V	R	E	T	P	L	H	L	G	H	L	R	L	M	T	Q	A	A
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.											.	.	.																					.
Template Conservation														.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.											.	.	.																					.
Template Sequence		D	A	L	V	E	A	A	M	M	G	A	D	.	.	.	.	.	.	.	.	.	.	W	T	M	A	A	I	I	.	.	.	.	.	.	.	.	.	G	C	A	G	L	K	A	T	L	A	.	.	.	A	I	R	K	G	K	T	V	A	L	A	N	K	E	S	L	V	S	A	G	.	G	L	M	I	D	A	V	R
Template Known Secondary structure									T	S			S	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	S	G	G	G							.	.	.				T	T	S							T								.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.											.	.	.																					.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.											.	.	.	.	100	.	.										.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140
		140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	G	A	V	I	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	G	T	T	L	L	P
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions