 |
| Job Description | P0ABW9 | | Confidence | 1.22% | Date | Thu Jan 5 11:16:35 GMT 2012 |
| Rank | 76 | Aligned Residues | 28 |
| % Identity | 18% | Template | c2npsD_ |
| PDB info |
PDB header:transport protein | Chain: D: PDB Molecule:syntaxin-6; |
PDBTitle: crystal structure of the early endosomal snare complex
|
| Resolution | 2.50 Å |
|
|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | L | D | K | L | D | A | A | L | R | F | Q | Q | E | A | L | N | L | R | A | Q | R | Q | E | V | L | A | A |
| Query Conservation |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |   |
|   |   |
|
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |
|
|   |
| Template Sequence |   |
M | L | E | D | F | S | H | E | L | E | S | T | Q | S | R | L | D | N | V | M | K | K | L | A | K | V | S | H |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|