 |
Job Description | P32677 | Confidence | 74.10% | Date | Thu Jan 5 11:50:05 GMT 2012 |
Rank | 358 | Aligned Residues | 35 |
% Identity | 14% | Template | d1z6ra1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| ROK associated domain
|
Resolution | 2.70 |
|
  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | I | R | D | Y | I | D | E | R | Y | A | S | A | L | T | R | E | S | V | A | Q | A | F | Y | I | S | P | N | Y | L | S | H | L | F | Q | K |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |   | . | . |
|   |   |
|
|   |
|
|
|   |   |
|
|
|
|   |   |
|
|
|   |
|
|   |
|
Template Sequence |   |
G | A | V | Y | R | L | I | D | Q | L | . |
. |
G | P | V | S | R | I | D | L | S | R | L | A | Q | L | A | P | A | S | I | T | K | I | V | H | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | S | S | . | . |
| S |
|
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | |
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|