Job Description P32677 Confidence 71.18% Date Thu Jan 5 11:50:05 GMT 2012 Rank 378 Aligned Residues 84 % Identity 12% Template d1vola1 SCOP info Cyclin-like Cyclin-like Transcription factor IIB (TFIIB), core domain Resolution 2.70

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	Q	T	L	N	E	M	Q	M	Q	P	Q	E	Q	Q	T	A	R	L	I	V	A	S	L	L	S	H	C	R	D	L	L	G	S	Q	I	Q	T	A	S	R	S	Q	A	L	F	E	A	I	R	D	Y	I	D	E	R	Y	A	S	A	L	T	R	E	S	V	A	Q	A	F	Y	I	S	P	N	Y	L	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	M	N	A	F	K	E	I	T	T	M	A	D	R	I	N	L	P	R	N	K	V	D	R	T	N	N	L	F	R	Q	A	Y	E	Q	K	S	L	K	G	R	A	N	D	A	I	A	S	A	C	L	Y	I	A	C	R	Q	E	G	V	P	R	T	F	K	E	I	C	A	V	S	R	I	S	K	K	E	I	G	R
Template Known Secondary structure																T	T																			T				T	T	S																	T	T										T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		205	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	F	K	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions