 |
Job Description | P32677 | Confidence | 67.65% | Date | Thu Jan 5 11:50:05 GMT 2012 |
Rank | 404 | Aligned Residues | 35 |
% Identity | 20% | Template | d1ku9a_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| DNA-binding protein Mj223
|
Resolution | 2.80 |
|
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | R | D | Y | I | D | E | R | Y | A | S | A | L | T | R | E | S | V | A | Q | A | F | Y | I | S | P | N | Y | L | S | H | L | F | Q | K |
Query Conservation |   |
  |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |   | . |   |   |   |   |
|   |   |
|
|
|   |   |
|   |
|
|
|
|   |
|
|   |   |
|   |   |
Template Sequence |   |
A | V | Y | A | I | L | Y | L | S | . |
D | K | P | L | T | I | S | D | I | X | E | E | L | K | I | S | K | G | N | V | S | X | S | L | K | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| . | S | S |
|  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
30 | . | . | . | . | . | . | . | . | |
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|