Return to main results Retrieve Phyre Job Id

Job DescriptionP32677
Confidence73.81%DateThu Jan 5 11:50:05 GMT 2012
Rank363Aligned Residues41
% Identity5%Templatec3r4kD_
PDB info PDB header:dna binding proteinChain: D: PDB Molecule:transcriptional regulator, iclr family; PDBTitle: crystal structure of a putative iclr transcriptional regulator2 (tm1040_3717) from silicibacter sp. tm1040 at 2.46 a resolution
Resolution2.46 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   166...170.........180.........190.........200.......
Predicted Secondary structure 









Query SS confidence 









































Query Sequence  RSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQ
Query Conservation          
   
        

  

     
   
 
 

Alig confidence 















.
























Template Conservation 


 
 
 


 

  .    

 


  


  

  


 
Template Sequence  GTVSKALTLLTYFNHG. RLEIGLSDLTRLSGXNKATVYRLXS
Template Known Secondary structure 
TT
BTT.BS

S
Template Predicted Secondary structure 



.







Template SS confidence 









































   2.......10....... ..20.........30.........40..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions