Job Description P32677 Confidence 68.40% Date Thu Jan 5 11:50:05 GMT 2012 Rank 400 Aligned Residues 157 % Identity 12% Template c3la2A_ PDB info PDB header:transcription Chain: A: PDB Molecule:global nitrogen regulator; PDBTitle: crystal structure of ntca in complex with 2-oxoglutarate Resolution 2.60 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		V	D	T	G	A	G	A	T	L	V	P	G	D	.	.	.	.	V	L	Y	V	P	A	G	G	W	N	F	P	Q	W	Q	A	P	A	T	T	F	S	V	L	F	G	K	Q	Q	L	G	F	S	V	V	Q	W	D	G	K	Q	Y	Q	N	L	A	K	Q	H	V	A	R	R	G	P	R	I	G	S	F	L	L	Q
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.
Template Conservation
Template Sequence		T	F	E	R	N	K	T	I	F	F	P	G	D	P	A	E	R	V	Y	F	L	L	K	G	A	V	K	L	S	R	V	Y	E	A	G	E	E	I	T	V	A	L	L	R	E	N	S	V	F	G	V	L	S	L	L	T	G	N	K	S	D	R	F	Y	H	A	V	A	F	T	P	V	E	L	L	S	A	P	I	E
Template Known Secondary structure					T	T						T	T	S	B										S									T	T	S										T	T					T					T	G	G	G	S	B								S	S	S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.										.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.
Query Sequence		T	L	N	E	M	Q	M	Q	P	Q	E	Q	Q	T	A	R	L	I	V	A	S	L	L	S	H	C	R	D	L	L	G	S	Q	I	Q	T	A	S	R	S	Q	A	L	F	E	A	I	R	D	Y	I	D	E	R	.	.	.	.	.	.	.	.	.	Y	A	S	A	L	T	R	E	S	V	A	Q	A	F	Y	I	S
Query Conservation																																																								.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	E	Q	A	L	K	E	N	P	E	L	S	M	L	M	L	R	G	L	S	S	R	I	L	Q	T	E	M	M	I	E	T	L	A	H	R	D	M	G	S	R	L	V	S	F	L	L	I	L	C	R	D	F	G	V	P	C	A	D	G	I	T	I	D	L	K	L	S	H	Q	A	I	A	E	A	I	G	S	T
Template Known Secondary structure																																						S	S																					S	S	S					S												T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	Y	L	S	H	L	F	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	T	V	T	R	L	L	G	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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