Job Description P32677 Confidence 95.05% Date Thu Jan 5 11:50:05 GMT 2012 Rank 88 Aligned Residues 103 % Identity 14% Template c3gziA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a transcriptional regulator of the tetr family2 (shew_3567) from shewanella loihica pv-4 at 2.05 a resolution Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	S	Q	I	Q	T	A	S	R	S	Q	A	L	F	E	A	I	R	D	Y	I	D	E	R	Y	A	S	A	L	T	R	E	S	V	A	Q	A	F	Y	I	S	P	N	Y	L	S	H	L	F	Q	K	T	G	A	I	G	F	N	E	Y	L	N	H	T	R	L	E	H	A	K	T	L	L	K	G	Y	D	L	K
Query Conservation
Alig confidence																																																										.	.																	.	.	.	.	.	.
Template Conservation																																																										.	.																	.	.	.	.	.	.
Template Sequence		V	G	R	P	S	G	D	T	Q	N	R	D	K	L	I	L	A	A	R	N	L	F	I	E	R	P	Y	A	Q	V	S	I	R	E	I	A	S	L	A	G	T	D	P	G	L	I	R	Y	Y	F	G	S	K	E	K	L	.	.	F	S	T	X	I	H	E	T	A	X	P	V	L	A	Q	L	.	.	.	.	.	.
Template Known Secondary structure																									T	S			S												T	S		T								S	S					.	.																	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.																	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	E	V	A	H	A	C	G	F	V	D	S	N	Y	F	C	R	L	F	R	K	N	T	E	R	S	P	S	E	Y	R
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	H	K	A	R	R	E	T	R	Q	E	S	P	A	A	L	L	Q	T	Y	Y	S	V	X	S	K	H	P	H	F	P	R
Template Known Secondary structure		.						T	S		T	T																S	T	T
Template Predicted Secondary structure		.
Template SS confidence
			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions