Job Description P32677 Confidence 85.45% Date Thu Jan 5 11:50:05 GMT 2012 Rank 294 Aligned Residues 156 % Identity 12% Template c3fx3A_ PDB info PDB header:camp-binding protein Chain: A: PDB Molecule:cyclic nucleotide-binding protein; PDBTitle: structure of a putative camp-binding regulatory protein from2 silicibacter pomeroyi dss-3 Resolution 2.20 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		F	V	D	T	G	A	G	A	T	L	V	P	G	D	.	.	.	.	V	L	Y	V	P	A	G	G	W	N	F	P	Q	W	Q	A	P	A	T	T	F	S	V	L	F	G	K	Q	Q	L	G	F	S	V	V	Q	W	D	G	K	Q	Y	Q	N	L	A	K	Q	H	V	A	R	R	G	P	R	I	G	S	F	L	L
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.																													.	.
Template Conservation																																																.	.
Template Sequence		R	S	Y	D	R	G	E	T	L	F	L	Q	E	E	K	A	Q	A	I	H	V	V	I	D	G	W	V	K	L	F	R	X	T	P	T	G	S	E	A	V	V	S	V	F	T	R	.	.	G	E	S	F	G	E	A	V	A	L	R	N	T	P	Y	P	V	S	A	E	A	V	T	P	C	E	V	X	H	I	P	S
Template Known Secondary structure						T	T						T	T	S											S									T	T	S										T	.	.	T											T				S	S					S	S	S
Template Predicted Secondary structure																																																.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	L	N	E	M	Q	M	Q	P	Q	E	Q	Q	T	A	R	L	I	V	A	S	L	L	S	H	C	R	D	L	L	G	S	Q	I	Q	T	A	S	R	S	Q	A	L	F	E	A	I	R	D	Y	I	D	E	R	Y	A	S	A	L	T	R	E	S	V	A	Q	A	F	Y	I	S	P	N	Y	L	S	H	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	F	V	S	L	X	R	R	D	P	E	I	C	I	S	I	L	A	T	T	F	G	H	L	H	S	L	V	A	Q	L	E	Q	L	K	A	Q	T	G	A	Q	R	V	A	E	F	L	L	E	L	C	D	C	E	V	T	L	P	Y	D	K	X	L	I	A	G	R	L	G	X	K	P	E	S	L	S	R	A	F
Template Known Secondary structure																																																													S		T							T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		207	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		197	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions