 |
Job Description | P32677 | Confidence | 89.62% | Date | Thu Jan 5 11:50:05 GMT 2012 |
Rank | 240 | Aligned Residues | 78 |
% Identity | 18% | Template | c3cjxE_ |
PDB info |
PDB header:unknown function | Chain: E: PDB Molecule:protein of unknown function with a cupin-like fold; |
PDBTitle: crystal structure of a protein of unknown function with a cupin-like2 fold (reut_b4571) from ralstonia eutropha jmp134 at 2.60 a resolution
|
Resolution | 2.60 Å |
|
 |
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  | . |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
L | I | N | G | P | L | S | L | R | Q | I | Y | F | A | S | S | N | G | P | V | P | D | L | A | Y | Q | V | D | F | P | R | L | E | I | V | L | E | G | E | F | V | D | T | G | A | . |
G | A | T | L | V | P | G | D | V | L | Y | V | P | A | G | G | W | N | F | P | Q | W | Q | A | P | A | . |
T | T | F | S | V | L | F |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   | . |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   |   |   |   |
|
|
|   |   |
|
|   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |
|
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | F | X | D | P | Y | N | G | L | X | V | X | R | A | S | F | A | P | G | L | T | L | P | L | H | F | H | T | G | T | V | H | X | Y | T | I | S | G | C | W | Y | Y | T | E | Y | P | G | Q | K | Q | T | A | G | C | Y | L | Y | E | P | G | G | S | I | H | Q | F | N | T | P | R | D | N | E | G | Q | T | E | V | I | F |
Template Known Secondary structure |   |
 |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |
| T | T |
| B |
|
|  |  |  |  | S | S |
|  |  |  |  |  |  |  | S |
| B |  |  | T | T |
| T | T |
|
| B |
| T | T |  |  |  |  |  |
| T | T |
|  |  |
|  |  |
|
| T | T |
| S | S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|