Return to main results Retrieve Phyre Job Id

Job DescriptionP32677
Confidence71.03%DateThu Jan 5 11:50:05 GMT 2012
Rank380Aligned Residues158
% Identity9%Templatec1zreB_
PDB info PDB header:gene regulation/dnaChain: B: PDB Molecule:catabolite gene activator; PDBTitle: 4 crystal structures of cap-dna with all base-pair2 substitutions at position 6, cap-[6g;17c]icap38 dna
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.... .....70.........80.........90.........100.........110.........120......
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Query Sequence  FVDTGAGATLVPGD. . . . VLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLL
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Template Sequence  HKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYK
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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   127..130.........140.........150.........160.........170.........180.... .....190.........
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Query Sequence  QTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYAS. . . . . . . ALTRESVAQAFYISP
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Template Sequence  KFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSR
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   101........110.........120.........130.........140.........150.........160.........170.........180
 
   200........
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Query Sequence  NYLSHLFQK
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Template Sequence  ETVGRILKM
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   181........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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