Job Description P32677 Confidence 93.35% Date Thu Jan 5 11:50:05 GMT 2012 Rank 123 Aligned Residues 86 % Identity 6% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210									.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.
Query Sequence		E	A	I	R	D	Y	I	D	E	R	Y	A	S	A	L	T	R	E	S	V	A	Q	A	F	Y	I	S	P	N	Y	L	S	H	L	F	Q	K	T	G	.	.	.	.	.	.	.	.	A	I	G	F	N	E	Y	L	N	H	T	R	L	E	H	A	K	T	L	L	K	G	Y	D	L	K	V	K	E	V	A	H	A
Query Conservation																																									.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.				.	.
Template Conservation																																																				.	.
Template Sequence		D	T	E	R	A	Q	L	D	V	M	K	L	L	N	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	.	.	K	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S	N	S	C	K	T	A	R	D	I	R	N	E
Template Known Secondary structure														T	T											T												S	G	G	G	T	T									.	.		S	S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		244	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		C	G	F	V	.	D	S	N	Y	F	C	R	L	F	R	K	N
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		L	Q	L	S	A	S	K	R	T	I	L	N	V	I	K	R	S
Template Known Secondary structure		T	T			S												T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions