Job Description P65367 Confidence 99.54% Date Thu Jan 5 12:10:13 GMT 2012 Rank 39 Aligned Residues 146 % Identity 12% Template d1ydga_ SCOP info Flavodoxin-like Flavoproteins WrbA-like Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																										.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	E	I	G	I	F	V	G	T	M	Y	G	N	S	L	L	V	A	E	E	A	E	A	I	L	T	A	Q	G	H	K	A	T	V	F	E	D	P	E	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	L	P	Y	Q	D	K	Y	V	L	V	V
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.
Template Sequence		V	K	.	L	A	I	V	F	Y	S	S	T	G	T	G	Y	A	M	A	Q	E	A	A	E	A	G	R	A	A	G	A	E	V	R	L	L	K	V	R	E	T	A	P	Q	D	V	I	D	G	Q	D	A	W	K	A	N	I	E	A	M	K	D	V	P	E	A	T	P	A	D	L	E	W	A	E	A	I	V	F	S
Template Known Secondary structure				.								S	S	S																T	T												S						T	T											T	T	T	S		B										S
Template Predicted Secondary structure				.
Template SS confidence
		5	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																						.	.																																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.																																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	S	T	T	G	Q	G	D	L	P	D	S	I	V	P	L	F	Q	G	I	.	.	K	D	S	L	G	F	Q	P	N	L	R	Y	G	V	I	A	L	G	D	S	S	Y	V	N	F	C	N	G	G	K	Q	F	D	A	L	L	Q	E	Q	S	A	Q	R	V	G	E	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.																																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																.	.																																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		S	P	T	R	.	F	G	G	A	T	S	Q	M	R	A	F	I	D	T	L	G	G	L	W	S	S	G	K	L	A	N	K	T	F	S	A	M	T	S	A	Q	N	V	N	G	G	Q	E	T	T	L	Q	T	L	Y	M	T	A	M	H	W	G	A	V	L	T	P	P	G	Y	T	D	E	V	I	F	K	S	G	G
Template Known Secondary structure						.	T	T												T	T						T	T	T	T	T	T										S	S	T	T	S	S	T	T												T	T	T							T	T		S						T	T
Template Predicted Secondary structure						.
Template SS confidence
		84	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
								122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	M	L	L	I	D	A	S	E	N	P	E	P	E	T	E	S	N	P	W	V	E	Q	W	G	T	L	L
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		N	P	Y	G	A	S	V	T	A	N	G	Q	P	L	L	E	N	D	R	A	S	I	R	H	Q	V	R	R	Q	V	E	L	T
Template Known Secondary structure			S	S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions