Return to main results Retrieve Phyre Job Id

Job DescriptionP65367
Confidence99.84%DateThu Jan 5 12:10:13 GMT 2012
Rank29Aligned Residues123
% Identity13%Templatec3n39D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:protein nrdi; PDBTitle: ribonucleotide reductase dimanganese(ii)-nrdf from escherichia coli in2 complex with nrdi
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60........ .70.........80...
Predicted Secondary structure 
























.





Query SS confidence 































































.














Query Sequence  GIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTGQGDLPDSI. VPLFQGIKDSLGFQP
Query Conservation   
 
 
  
 

  
  

  
   
                      
   

 
 
  
   .  
   
      
 
Alig confidence 

















.........




































.






..





Template Conservation 

 
 
 




  
  
.........              
      


 



 
            

..      
Template Sequence  LVYFSSSSENTQRFIERL. . . . . . . . . GLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFL. . NDEHNR
Template Known Secondary structure 

TT
.........



SSSS





S



SSSSSTTS
..SS
Template Predicted Secondary structure 



.........























..




Template SS confidence 















































































   4.....10.........20. ........30.........40.........50.........60...... ...70..
 
   84.....90....... ..100.........110.........120.........130.........140....
Predicted Secondary structure 




.












Query SS confidence 













.














































Query Sequence  NLRYGVIALGDSSY. VNFCNGGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQW
Query Conservation      






  
.  
      
   
   

  
      
             
    
Alig confidence 













.













......


























Template Conservation       
 
 

  
   

 
   
    ...... 

   
 
  
   
       
   
Template Sequence  ALLRGVIASGNRNFGEAYGRAGDVIARKC. . . . . . GVPWLYRFELMGTQSDIENVRKGVTEF
Template Known Secondary structure  T
GGGGGGTT......


TT

Template Predicted Secondary structure 






......







Template SS confidence 





























































   73......80.........90.........100. ........110.........120........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions