Job Description P65367 Confidence 98.62% Date Thu Jan 5 12:10:13 GMT 2012 Rank 49 Aligned Residues 142 % Identity 12% Template c3lcmB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of smu.1420 from streptococcus mutans ua159 Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																										.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure												.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	E	I	G	I	F	V	G	T	.	.	M	Y	G	N	S	L	L	V	A	E	E	A	E	A	I	L	T	A	Q	G	H	K	A	T	V	F	E	D	P	E	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	L	P	Y	Q	D	K	Y	V	L
Query Conservation												.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.								.	.																		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																											.
Template Sequence		M	K	.	I	L	I	V	Y	T	H	P	N	P	T	S	F	N	A	E	I	L	K	Q	V	Q	T	N	L	S	.	K	E	H	T	V	S	T	L	D	L	Y	A	E	H	F	D	P	V	L	Q	F	N	E	T	H	K	R	R	D	L	A	K	V	A	E	M	E	K	Y	R	D	L	V	T	W	A	D	H	L	I
Template Known Secondary structure				.								S		T	T	S													S		.	T	T	S							T	T	T	T	T								S	S	S	S		G	G	G	G	G	G		G	G	G											S
Template Predicted Secondary structure				.																											.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.												.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Query Sequence		V	V	T	S	T	T	G	Q	G	D	L	P	D	S	I	V	P	L	F	Q	G	I	K	.	.	.	.	.	.	.	.	.	.	.	D	S	L	G	F	Q	P	N	L	R	Y	G	V	I	A	L	G	D	S	S	Y	V	N	F	.	.	.	.	C	N	G	G	K	Q	F	D	A	L	L	Q	E	Q	S	A	Q	R
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Alig confidence								.																	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation								.
Template Sequence		F	I	F	P	I	W	.	W	S	G	M	P	A	I	L	K	G	F	I	D	R	V	F	V	A	D	F	A	Y	S	Y	K	K	V	G	L	E	G	H	L	Q	G	K	S	A	W	I	I	T	T	H	N	T	P	S	F	A	M	P	F	V	Q	D	Y	G	K	V	L	K	K	Q	I	L	K	P	C	A	I	S	P
Template Known Secondary structure							B	.	T	T	B													S		B	T	T	T					S	S	S						T	T										S	S		G	G	G	G	G	G	S	S		T	T							T	T	T	T	T	T
Template Predicted Secondary structure								.
Template SS confidence
		79	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	E	M	L	L	I	D	A	S	E	N	P	E	P	E	T	E	S	N	P	W	V	E	Q	W	G	T	L
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		V	K	L	T	E	L	T	S	I	E	K	I	S	.	.	D	D	E	R	Q	K	L	L	H	K	V	A	Q	I
Template Known Secondary structure									S	T	T	T	S		.	.
Template Predicted Secondary structure															.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions