Job Description P65367 Confidence 43.97% Date Thu Jan 5 12:10:13 GMT 2012 Rank 125 Aligned Residues 84 % Identity 7% Template c3chvA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:prokaryotic domain of unknown function (duf849) with a tim PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution Resolution 1.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.									.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.
Query Sequence		N	S	L	L	V	A	E	E	A	E	A	I	L	T	A	Q	G	H	K	A	T	V	F	E	.	.	.	.	.	.	.	.	D	P	E	L	S	D	W	L	P	Y	Q	D	K	Y	V	L	V	V	T	S	T	T	G	Q	G	D	L	P	D	S	I	V	P	L	F	Q	G	I	K	D	S	L	G	F	Q	P	N	L
Query Conservation																										.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.																							.
Template Conservation																																																								.
Template Sequence		N	P	P	D	L	V	D	W	L	A	A	Q	X	R	S	Y	R	V	T	P	E	I	E	A	F	D	L	S	H	I	L	R	A	I	D	X	H	G	R	G	L	L	Y	G	K	L	Y	V	Q	F	V	X	G	V	.	K	N	A	X	P	A	D	R	E	V	F	D	F	Y	V	R	X	X	R	T	R	A	P	Q	A
Template Known Secondary structure																		T								S	S													T	T		S		S	S										.	T	T	S																				T	T	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	G	V	I	A	L	G	D	S	S	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	W	C	A	A	G	I	G	A	N	Q	L	T
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions