 |
Job Description | P65367 | Confidence | 20.87% | Date | Thu Jan 5 12:10:13 GMT 2012 |
Rank | 227 | Aligned Residues | 53 |
% Identity | 15% | Template | c1ggmB_ |
PDB info |
PDB header:ligase | Chain: B: PDB Molecule:protein (glycyl-trna synthetase); |
PDBTitle: glycyl-trna synthetase from thermus thermophilus complexed with2 glycyl-adenylate
|
Resolution | 3.40 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | |
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | I | G | I | F | V | G | T | M | Y | G | . |
N | S | L | L | V | A | E | E | A | E | A | I | L | T | A | Q | G | H | K | A | T | V | F | E | D | . |
. |
. |
. |
. |
P | E | L | S | D | W | L | P | Y | Q | D | K | Y | V | L | V | V |
Query Conservation |   |
  |
|   |
|   |
|   |
|   |   |
| . |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |   |
|
|   |   |   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|
|   |   |
|
|
|
Template Sequence |   |
K | V | A | V | I | P | L | V | K | N | R | P | E | I | T | E | Y | A | K | R | L | K | A | R | L | L | A | L | G | L | G | R | V | L | Y | E | D | T | G | N | I | G | K | A | Y | R | R | H | D | E | V | G | T | P | F | A | V | T | V |
Template Known Secondary structure |   |
S |  |  |  |  |  | S |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S | S |
|  |  |  |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|