Job Description P76472 Confidence 100.00% Date Wed Jan 25 15:21:08 GMT 2012 Rank 14 Aligned Residues 198 % Identity 18% Template d2c71a1 SCOP info 7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase Resolution 1.05

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		T	K	V	G	L	R	I	D	V	D	T	F	R	G	T	R	E	G	.	V	P	R	L	L	E	I	L	S	K	H	N	I	Q	A	S	I	F	F	S	V	G	P	D	N	M	G	R	H	L	W	R	L	V	K	P	Q	F	L	W	K	M	L	R	S	N	A	A	S	L	Y	G	W	D	I	L	L	A	G	T	A
Query Conservation																				.
Alig confidence										.	.	.	.							.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	V	A	L	T	F	D	.	.	.	.	D	G	P	D	N	V	L	T	A	R	V	L	D	K	L	D	K	Y	N	V	K	A	T	F	M	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										.	.	.	.	S																		T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		480	.	.	.	.	.	.	.					.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		W	P	G	K	E	I	G	H	A	N	A	D	I	I	R	E	A	.	A	K	H	H	E	V	G	L	H	A	W	D	H	H	A	W	Q	A	R	S	G	N	W	D	R	Q	T	M	I	D	D	I	A	R	G	L	R	T	L	E	E	I	I	G	Q	P	V	T	C	S	A	A	A	G	W	R	A	D	Q	K	V	I
Query Conservation																			.
Alig confidence		.	.																.														.	.	.	.
Template Conservation		.	.																														.	.	.	.
Template Sequence		.	.	G	Q	R	V	N	D	S	T	A	A	I	I	R	R	M	V	N	S	G	H	E	I	G	N	H	S	W	S	Y	.	.	.	.	S	G	M	A	N	M	S	P	D	Q	I	R	K	S	I	A	D	T	N	A	V	I	Q	K	Y	A	G	T	T	P	K	F	F	R	P	P	N	L	E	T	S	P	T	L	F
Template Known Secondary structure		.	.	G	G	G		S													T	T								S	S	S	.	.	.	.	S			T	T																						S				S					G	G	G
Template Predicted Secondary structure		.	.																														.	.	.	.
Template SS confidence
				515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.					.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		E	A	K	E	A	F	H	L	R	Y	N	S	D	C	R	G	A	M	P	F	R	P	L	L	E	S	G	N	P	G	T	A	Q	I	P	V	T	L	P	T	W	D	E	V	I	G	R	D	V	K	A	E	D	F	N	G	W	L	L	N	R	I	L	R	D	K	G	T	P	V	Y	T	I	H	A	E	V	E	G	.
Query Conservation																																																																																	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.																																.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Sequence		N	N	V	D	L	V	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	L	T	A	N	D	W	.	.	.	.	.	I	P	S	T	T	A	E	Q	R	A	A	A	V	I	N	G	V	R	D	G	T	I	I	L	L	H	D	V	Q	P	E	P
Template Known Secondary structure						S			B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B			S	T	T	.	.	.	.	.		T	T	S															T	T	B						S			S	S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template SS confidence
		589	590	.	.	.	.	.	.																												.	.	.	600	.	.	.	.						.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	Y	Q	H	N	F	V	D	L	L	K	R	A	A	Q	E	G	V	T	F	C	P	L	S	E	L	L	S	E	T	L	P	L	G	Q	V	V	R	G	N	I	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	P	T	P	E	A	L	D	I	I	I	P	T	L	K	S	R	G	Y	E	F	V	T	L	T	E	L	F	T	L	K	G	V	P	I	D	P	S	V	K	R	M	Y	N
Template Known Secondary structure																		T	T														T					T	T			S		B	S
Template Predicted Secondary structure
Template SS confidence
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions