Job Description P76472 Confidence 100.00% Date Wed Jan 25 15:21:08 GMT 2012 Rank 10 Aligned Residues 222 % Identity 18% Template c3s6oD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:polysaccharide deacetylase family protein; PDBTitle: crystal structure of a polysaccharide deacetylase family protein from2 burkholderia pseudomallei Resolution 1.85 Å

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		4	.	.	.	.	.	10	.	.	.																																						.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	L	R	I	D	V	D	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	T	R	E	G	V	P	R	L	L	E	I	L	S	K	H	N	I	Q	A	S	I	F	F	S	V	G	P	D	N	M	G
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		V	Q	F	V	L	N	Y	E	E	G	G	E	N	C	V	L	H	G	D	P	A	S	E	Q	F	L	S	E	I	V	G	A	A	A	Y	P	A	R	H	M	S	M	E	S	I	Y	E	Y	G	S	R	A	G	V	W	R	I	L	R	E	F	D	K	R	G	L	P	L	T	V	F	G	V	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	S	S	S		G	G	G	T		S	S				S	S	S	S	S	T	T					S	S															T													T									.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	L	W	R	L	V	K	P	Q	F	L	W	K	M	L	R	S	N	A	A	S	L	Y	G	W	D	I	L	L	A	G	T	A	W	P	G	K	E	I	G	H	A	N	A	D	I	I	R	E	A	A	K	H	H	E	V	G	L	H	A	W	D	H	H	A	W	Q	A	R	S	G	N	W	D	R	Q	T	M	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	A	I	E	R	H	P	E	L	A	R	A	F	V	E	L	G	H	E	I	A	C	H	G	W	R	W	.	.	.	.	I	H	Y	Q	D	M	T	P	E	R	E	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T								S	S		.	.	.	.	S			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template SS confidence
																																						104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																																					.				.	.	.
Query SS confidence																																																					.				.	.	.
Query Sequence		D	D	I	A	R	G	L	R	T	L	E	E	I	I	G	Q	P	V	T	C	S	A	A	A	G	W	R	A	D	Q	K	V	I	E	A	K	E	A	F	H	L	R	Y	N	S	D	C	R	G	A	M	.	P	F	R	.	.	.	P	L	L	E	S	G	N	P	G	T	A	Q	I	P	V	T	L	P	T	W	D	E
Query Conservation																																																					.				.	.	.
Alig confidence																															.																						.				.	.	.
Template Conservation																															.
Template Sequence		E	H	M	R	L	G	M	E	A	I	E	R	V	T	G	V	R	P	L	G	W	Y	T	G	R	D	S	P	N	.	T	H	R	L	V	A	E	Y	G	G	F	L	Y	D	S	D	H	Y	G	D	D	L	P	F	W	M	D	V	E	V	S	G	G	A	S	V	P	Q	L	I	V	P	Y	T	L	D	A	N	D	M
Template Known Secondary structure																S									S	S			T	T	.												S							S		S	S									T	T	S												S	S	S	B	G	G
Template Predicted Secondary structure																															.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		203	.	.	.	.	.	.	210											.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																																	.														.
Query SS confidence										.	.	.	.	.	.	.	.	.	.																																	.														.
Query Sequence		V	I	G	R	D	V	K	A	.	.	.	.	.	.	.	.	.	.	E	D	F	N	G	W	L	L	N	R	I	L	R	D	K	G	T	P	V	Y	T	I	H	A	E	V	E	G	C	A	Y	Q	.	H	N	F	V	D	L	L	K	R	A	A	Q	E	.	G	V	T	F	C	P	L	S	E	L	L	S	E	T	L
Query Conservation										.	.	.	.	.	.	.	.	.	.																																	.														.
Alig confidence										.	.	.	.	.	.	.	.	.	.																																	.														.
Template Conservation
Template Sequence		R	F	A	T	P	Q	G	F	N	T	A	D	H	F	F	H	Y	L	R	D	A	F	D	V	L	Y	E	E	G	D	E	A	P	K	M	M	S	I	G	M	H	C	R	L	L	G	R	P	G	R	F	R	A	L	Q	R	F	L	D	H	I	E	R	H	D	R	V	W	V	A	R	R	V	E	I	A	R	H	W	R
Template Known Secondary structure		G	G	G	S	S	S				S																			T	T	T	S										T	T	T	T	T	S																T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		271	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	H
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		303	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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