Job Description P76472 Confidence 11.70% Date Wed Jan 25 15:21:08 GMT 2012 Rank 88 Aligned Residues 201 % Identity 9% Template c3obeB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of a sugar phosphate isomerase/epimerase (bdi_3400)2 from parabacteroides distasonis atcc 8503 at 1.70 a resolution Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	E	G	V	P	R	L	L	E	I	L	S	K	H	N	I	Q	A	S	I	F	F	S	V	G	P	D	N	M	G	R	H	L	W	R	L	V	K	P	Q	F	L	W	K	M	L	R	S	N	A	A	S	L	Y	G	W	D	I	L	L	A	G	T	A	W	P	G	K	E	I	G	H	A	N	A	D	I	I	R
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	I	A	S	K	D	Y	K	K	X	V	D	D	A	G	L	R	I	S	S	S	H	L	T	P	S	L	R	E	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	N	X	P	K	F	D	E	F	W	K	K
Template Known Secondary structure				B												T	T							B				S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																																				.	.	.	.	.	.	.	.	.	140	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.																									150	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	A	K	H	H	E	V	G	L	H	A	W	D	H	H	A	W	Q	A	R	S	G	N	W	D	R	Q	T	M	I	D	D	I	A	R	G	L	R	T	L	E	E	I	I	G	Q	P	V	T	C	S	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		A	T	D	I	H	A	E	L	G	V	S	C	X	V	Q	.	.	.	.	P	S	L	P	R	I	E	N	E	D	D	A	K	V	V	S	E	I	F	N	R	A	G	E	I	T	K	K	A	G	I	L	W	G	Y	H	N	H	S	N	E	F	K	R	V	L	K	A	G	E	K	P	E	Q	N	P	N	P	W	A	P
Template Known Secondary structure										T		S					.	.	.	.							S	S																				T	T	T									S	G	G	G	S					T	T					S	S			S	S	S
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		W	R	A	D	Q	K	V	I	E	A	K	E	A	.	.	.	.	.	F	H	L	R	Y	N	S	D	C	R	G	A	M	P	F	R	P	L	L	E	S	G	N	P	G	T	A	Q	I	P	V	T	L	P	T	W	D	E	V	I	G	R	D	V	K	A	E	D	F	N	G	W	L	L	N	R	I	L	R	D	K	G
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.																																			.	.
Template Conservation																																																						.	.
Template Sequence		P	K	G	T	Y	I	E	E	L	F	L	K	N	T	D	P	D	K	V	X	F	E	L	D	V	Y	W	A	V	X	G	Q	Q	D	P	V	E	W	X	E	N	Y	P	N	R	F	K	L	L	H	I	K	.	.	D	R	W	I	I	G	D	S	G	X	X	N	F	P	N	I	F	K	K	A	Y	E	I	G	I	L
Template Known Secondary structure				S											S		T	T	T													T	T										S	T	T	T								.	.		S	S	S	T	T		S	S	S														T
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	V	Y	T	I	H	A	E	V	E	G	C	A	Y	Q	H	N	F	V	D	L	L	K	R	A	A	Q	E	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	Y	V	E	L	E	G	D	K	K	G	R	T	Q	F	E	G	V	E	K	S	A	A	Y	L	Q	A	A	P	F
Template Known Secondary structure											T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions