Job Description P76472 Confidence 98.85% Date Wed Jan 25 15:21:08 GMT 2012 Rank 21 Aligned Residues 164 % Identity 15% Template c3hftA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:wbms, polysaccharide deacetylase involved in o-antigen PDBTitle: crystal structure of a putative polysaccharide deacetylase involved in2 o-antigen biosynthesis (wbms, bb0128) from bordetella bronchiseptica3 at 1.90 a resolution Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	G	L	R	I	D	V	D	T	F	R	G	T	R	E	G	V	P	R	L	L	E	I	L	S	K	H	N	I	Q	A	S	I	F	F	S	V	G	P	D	N	M	G	R	H	L	W	R	L	V	K	P	Q	F	L	W	K	M	L	R	S	N	A	A	S	L	Y	G	W	D	I	L	L	A	G	T	A	W	P
Query Conservation
Alig confidence												.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	F	L	T	F	D	I	D	W	.	.	A	A	D	F	V	L	Q	D	T	I	D	L	I	E	G	A	G	V	C	A	T	W	F	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	.	.																	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		G	K	E	I	G	H	A	N	A	D	I	I	R	E	A	.	A	K	H	H	E	V	G	L	H	A	W	D	H	H	A	W	Q	A	R	S	G	N	W	D	R	Q	T	M	I	D	D	I	A	R	G	L	R	T	L	E	E	I	I	G	Q	P	V	T	C	S	A	A	A	G	W	R	A	D	Q	K	V	I	E	A
Query Conservation																	.
Alig confidence		.	.	.	.	.											.									.	.	.	.																												.	.	.	.	.
Template Conservation		.	.	.	.	.																				.	.	.	.																												.	.	.	.	.
Template Sequence		.	.	.	.	.	H	S	T	P	L	L	E	N	I	R	R	N	P	L	F	E	L	G	V	.	.	.	.	H	P	N	F	N	P	L	L	A	G	A	H	A	E	G	V	Q	E	I	L	D	R	T	L	E	L	A	.	.	.	.	.	P	G	C	V	S	V	R	S	H	S	L	V	Q	A	T	S	I	L	N	X
Template Known Secondary structure		.	.	.	.	.	S			T									T	T						.	.	.	.										S			S												T	T	S	.	.	.	.	.	T	T							G	G	G
Template Predicted Secondary structure		.	.	.	.	.																				.	.	.	.																												.	.	.	.	.
Template SS confidence
							72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.						.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220								.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.
Query Sequence		K	E	A	F	H	L	R	Y	N	S	D	C	R	G	A	M	P	F	R	P	L	L	E	S	G	N	P	G	T	A	Q	I	P	V	T	L	P	T	W	D	E	V	I	G	R	D	V	K	A	E	D	F	N	G	W	L	L	N	R	.	.	.	.	.	.	.	I	L	R	D	K	G	T	P	V	Y	T	I	H	A
Query Conservation																																																													.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.
Template Sequence		F	G	E	R	R	L	R	Y	D	C	N	I	L	V	P	W	.	.	.	.	.	.	.	.	.	D	A	G	I	V	L	Q	P	W	R	H	W	T	G	D	X	V	R	V	P	Y	L	W	E	D	D	V	A	C	L	Y	D	W	E	F	D	S	T	F	D	Y	W	Y	Q	P	D	G	I	N	V	L	D	F	H	P
Template Known Secondary structure					T	T								B			T	.	.	.	.	.	.	.	.	.	T	S	S									S	S	T	T						B											T			S	S		S	S		T	T			T	T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.										.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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