Job Description P76472 Confidence 100.00% Date Wed Jan 25 15:21:08 GMT 2012 Rank 2 Aligned Residues 189 % Identity 18% Template c1w17A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable polysaccharide deacetylase pdaa; PDBTitle: structure of bacillus subtilis pdaa, a family 42 carbohydrate esterase. Resolution 1.9 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		T	K	V	G	L	R	I	D	V	D	T	F	R	G	T	R	E	G	.	V	P	R	L	L	E	I	L	S	K	H	N	I	Q	A	S	I	F	F	S	V	G	P	D	N	M	G	R	H	L	W	R	L	V	K	P	Q	F	L	W	K	M	L	R	S	N	A	A	S	L	Y	G	W	D	I	L	L	A	G	T	A
Query Conservation																				.
Alig confidence										.	.	.	.							.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	I	Y	L	T	F	D	.	.	.	.	N	G	Y	E	N	G	Y	T	P	K	V	L	D	V	L	K	K	H	R	V	T	G	T	F	F	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T								.	.	.	.		S	S			S												T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		W	P	G	K	E	I	G	H	A	N	A	D	I	I	R	E	A	A	K	H	H	E	V	G	L	H	A	W	D	H	H	A	W	Q	A	R	S	G	N	W	D	R	Q	T	M	I	D	D	I	A	R	G	L	R	T	L	E	E	I	I	G	Q	P	V	T	.	C	S	A	A	A	G	W	R	A	D	Q	K	V	I
Query Conservation																																																																			.
Alig confidence		.	.																													.	.	.	.																																.
Template Conservation		.	.																													.	.	.	.
Template Sequence		.	.	G	H	F	V	K	D	Q	P	Q	L	I	K	R	M	S	D	E	G	H	I	I	G	N	H	S	F	H	H	.	.	.	.	P	D	L	T	T	K	T	A	D	Q	I	Q	D	E	L	D	S	V	N	E	E	V	Y	K	I	T	G	K	Q	D	N	L	Y	L	R	P	P	R	G	V	F	S	E	Y	V	L
Template Known Secondary structure		.	.																	T	T								S	S		.	.	.	.			G	G	G	S																					S										G	G	G
Template Predicted Secondary structure		.	.																													.	.	.	.
Template SS confidence
				101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	K	E	A	F	H	L	R	Y	N	S	D	C	R	G	A	M	P	F	R	P	L	L	E	S	G	N	P	G	T	A	Q	I	P	V	T	L	P	T	W	D	E	V	I	G	R	D	V	K	A	E	D	F	N	G	W	L	L	N	R	I	L	R	D	K	G	T	P	V	Y	T	I	H	A	E	V	E	G	C
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.											.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.											.	.
Template Sequence		K	E	T	K	R	L	G	Y	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	F	W	S	V	A	F	V	D	W	K	I	N	N	Q	K	G	K	K	Y	A	Y	D	H	M	I	K	Q	A	.	.	.	H	P	G	A	I	Y	L	L	H	T	.	.	V	S	R
Template Known Secondary structure							T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	B			S				T	T															T		.	.	.		T	T							S	.	.		S	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.											.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.																								.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.			.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	Q	H	N	F	V	D	L	L	K	R	A	A	Q	E	G	V	T	F	C	P	L	S	E	L	L	S	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	N	A	E	A	L	D	D	A	I	T	D	L	K	K	Q	G	Y	T	F	K	S	I	D	D	L	M	F	E	K
Template Known Secondary structure		T															T	T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions