Job Description P76472 Confidence 88.18% Date Wed Jan 25 15:21:08 GMT 2012 Rank 29 Aligned Residues 193 % Identity 10% Template c1htyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-mannosidase ii; PDBTitle: golgi alpha-mannosidase ii Resolution 1.40 Å

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		91	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																																																				.
Query SS confidence												.																																																				.
Query Sequence		A	D	I	I	R	E	A	A	K	H	.	H	E	V	G	L	H	A	W	D	H	H	A	W	Q	A	R	S	G	N	W	D	R	Q	T	M	I	D	D	I	A	R	G	L	R	T	L	E	E	I	I	G	Q	P	V	T	C	S	A	A	A	G	.	W	R	A	D	Q	K	V	I	E	A	K	E	A	F	H	L	R
Query Conservation												.																																																				.
Alig confidence												.											.	.	.	.																																						.
Template Conservation																							.	.	.	.
Template Sequence		L	Q	X	K	S	I	V	K	N	G	Q	L	E	F	V	T	G	G	W	V	X	.	.	.	.	P	D	E	A	N	S	H	W	R	N	V	L	L	Q	L	T	E	G	Q	T	W	L	K	Q	F	X	N	V	T	P	T	A	S	W	A	I	D	P	F	G	H	S	P	T	X	P	Y	I	L	Q	K	S	G	F	K
Template Known Secondary structure										T	T	S				S	S			S	S		.	.	.	.	B		S	S	S																					T												S	S	S	B		T								T	T	T
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		169	170	.	.	.	.	.	.	.													.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	N	S	D	C	R	G	A	M	.	.	.	.	.	.	.	.	.	.	.	.	P	F	R	P	L	L	E	S	G	N	P	G	T	A	Q	I	P	V	T	L	P	T	W	D	E	V	I	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	M	L	I	Q	R	T	H	Y	S	V	K	K	E	L	A	Q	Q	R	Q	L	E	F	L	W	R	Q	I	W	D	N	K	G	D	T	A	L	F	T	H	X	X	P	F	Y	S	Y	D	I	P	H	T	C	G	P	D	P	K	V	C	C	Q	F	D	F	K	R	X	G	S	F	G	L	S	C	P	W	K	V	P
Template Known Secondary structure																			T	T		S							T	T		S	S		T	T									S	S		S	S	G	G	G	T	S	S	S						G	G	G		T	T		S	S	T	T	S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
											207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.						.	.	.	.	.	.	.	.	250	.	.	.	.	.	.						.	.	.	260	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																												.	.									.	.	.	.	.																.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																												.	.									.	.	.	.	.																.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	D	V	K	A	E	D	F	N	G	W	L	L	N	R	I	L	R	D	K	G	T	P	V	Y	T	I	H	.	.	A	E	V	E	G	C	A	Y	.	.	.	.	.	Q	H	N	F	V	D	L	L	K	R	A	A	Q	E	G	.	.	.	.	.	V	T	F	C	P	L	S	E	L
Query Conservation		.	.	.	.	.	.	.	.	.																												.	.									.	.	.	.	.																.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																												.	.									.	.	.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		P	R	T	I	S	D	Q	N	V	A	A	R	S	D	L	L	V	D	Q	W	K	K	K	A	E	L	Y	R	T	N	V	L	L	I	P	L	G	D	D	F	R	F	K	Q	N	T	E	W	D	V	Q	R	V	N	Y	E	R	L	F	E	H	I	N	S	Q	A	H	F	N	V	Q	A	Q	F	G	T	L	Q	E	Y
Template Known Secondary structure							T	T	T																	T	T	S	S	S	S										T		S		S																						G	G	G
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	E	T	L	P	L	G	Q	V	V	R	G	N	I	A	G	R	E	G	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	A	V	H	Q	A	E	R	A	G	Q	A	E	F	P	T	L	S	G	D	F
Template Known Secondary structure											T	T	S								S		B
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions