|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  | . | . |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
M | S | E | V | E | F | S | H | E | Y | W | M | R | H | A | L | T | L | A | K | R | A | W | D | E | R | E | V | P | V | G | A | V | L | V | . |
. |
H | N | N | R | V | I | G | E | G | W | N | R | P | I | G | R | H | D | P | T | A | H | A | E | I | M | A | L | R | Q | G | G | L | V | M | Q | N | Y | R | L | I | . |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|
| . | . |   |   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|   |   |   |   |
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
Template Sequence |   |
E | P | R | V | L | A | A | P | E | A | R | M | G | Y | V | L | E | L | V | R | A | N | I | A | A | D | G | G | P | F | A | A | A | V | F | E | R | D | S | G | L | L | I | A | A | G | T | N | R | V | V | P | G | R | C | S | A | A | H | A | E | I | L | A | L | S | L | A | Q | A | K | L | D | T | H | D | L | S | A | D |
Template Known Secondary structure |   |
S |
|
| B |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |
|  |  |  |  |  |  | T | T | T |
| B |  |  |  |  |  |  |
|
| T | T | T | T | T |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
| T | T |
| T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
D | A | T | L | Y | V | T | L | E | P | C | V | M | C | A | G | A | M | I | H | S | R | I | G | R | V | V | F | G | A | R | D | A | K | T | G | A | A | G | . |
. |
. |
. |
. |
. |
. |
. |
S | L | M | D | V | L | H | H | P | G | M | N | H | R | V | E | I | T | E | G | I | L | A | D | E | C | A | A | L | L |
Query Conservation |   |
. | . | . |   |   |
|
|
|   |
|
|
|
|
|   |
|
|   |   |
|
|   |   |   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |
|
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |
|
|
|   |   |
|
|
|   |
|
|
|   |   |
|
|
Template Sequence |   |
G | L | P | A | C | E | L | V | T | S | A | E | P | C | V | M | C | F | G | A | V | I | W | S | G | V | R | S | L | V | C | A | A | R | S | D | D | V | E | A | I | G | F | D | E | G | P | R | P | E | N | W | M | G | G | L | E | A | R | G | . |
. |
. |
. |
I | T | V | T | T | G | L | L | R | D | A | A | C | A | L | L |
Template Known Secondary structure |   |
T | S |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |
|  |  |  |  |  |  | T | T |
|
|
|
|
|
|
| T | T |  |  |  |  |  |  |  | T | T | . | . | . | . |
|  |  |  |
|
| T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
|
|
|
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
  |
  |   |
146 | . | . | . | 150 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
S | D | F | F | R | M |
Query Conservation |   |
  |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
Template Sequence |   |
R | E | Y | N | A | C |
Template Known Secondary structure |   |
 |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
175 | . | . | . | . | 180 |
  |