Return to main results Retrieve Phyre Job Id

Job DescriptionP68398
Confidence98.18%DateThu Jan 5 12:11:02 GMT 2012
Rank23Aligned Residues114
% Identity18%Templated2fr5a1
SCOP infoCytidine deaminase-like Cytidine deaminase-like Cytidine deaminase
Resolution1.48

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20...... ...30.........40.........50.........60.........70.........80...
Predicted Secondary structure 

.






















..
Query SS confidence 



















.
























































. .
Query Sequence  SHEYWMRHALTLAKRAWDER. EVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVT. .
Query Conservation    
  
  

  
  
   
.  






    

  
 
          


  

  
            


 
..
Alig confidence 



















.










































.












..
Template Conservation      
   
  
   

 


 
 




   

 
  
 




      



 

  
   .
   
  
 
     
Template Sequence  HVQRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAERTAIQKAISE. GYKDFRAIAISSDLQ
Template Known Secondary structure  TT
B
TTT


TTS

B

SSGGG
B
T.T


S
S
Template Predicted Secondary structure 
























.






Template SS confidence 















































































   14.....20.........30.........40.........50.........60.........70....... ..80.........90..
 
   84.....90.........100.........110.........120.
Predicted Secondary structure  ...
















Query SS confidence  . . .





































Query Sequence  . . . LEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVL
Query Conservation  ...



 

  

   

 




         
     
Alig confidence  ...





































Template Conservation       


 


 
 
      
            

 


Template Sequence  EEFISPCGACRQVMREFGTDWAVYMTKPDGTFVVRTVQELL
Template Known Secondary structure  SS




T
SS

TTS
S
Template Predicted Secondary structure 














Template SS confidence 








































   93......100.........110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions