Return to main results Retrieve Phyre Job Id

Job DescriptionP68398
Confidence98.26%DateThu Jan 5 12:11:02 GMT 2012
Rank20Aligned Residues115
% Identity17%Templated2d30a1
SCOP infoCytidine deaminase-like Cytidine deaminase-like Cytidine deaminase
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20..... ....30.........40.........50.........60.........70.........80..
Predicted Secondary structure 

.























..
Query SS confidence 



















.
























































. .
Query Sequence  FSHEYWMRHALTLAKRAWDE. REVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYV. .
Query Conservation     
  
  

  
  
   .
  






    

  
 
          


  

  
            


 ..
Alig confidence 



















.











































.











..
Template Conservation 
    
   
  
   

 


 
 



     
 
  
 



       



 

  
   .
   
  
 
    
Template Sequence  MNSKQLIQEAIEARKQAYVPYSKFQVGAALLTQDGKVYRGCNVENASYGLCNCAERTALFKAVSE. GDKEFVAIAIVADT
Template Known Secondary structure 

TT
B
TTT


TT


B

SSGGG
B
T.T


S
Template Predicted Secondary structure 
























.





Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60..... ....70.........
 
   83......90....... ..100.........110.........120.
Predicted Secondary structure  ..




.











Query SS confidence  . .














.























Query Sequence  . . TLEPCVMCAGAMIHS. RIGRVVFGARDAKTGAAGSLMDVL
Query Conservation  ..




 

  

   .

 




         
     
Alig confidence  ..














.























Template Conservation       


 


 
 
       
      
     

 


Template Sequence  KRPVPPCGACRQVMVELCKQDTKVYLSNLHGDVQETTVGELL
Template Known Secondary structure  SS




S
TT

SSS
S
Template Predicted Secondary structure 

















Template SS confidence 









































   80.........90.........100.........110.........120.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions