Return to main results Retrieve Phyre Job Id

Job DescriptionP68398
Confidence100.00%DateThu Jan 5 12:11:02 GMT 2012
Rank12Aligned Residues152
% Identity29%Templated1wkqa_
SCOP infoCytidine deaminase-like Cytidine deaminase-like Deoxycytidylate deaminase-like
Resolution1.17

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20....... ..30.........40.........50.........60.........70.........80....
Predicted Secondary structure 



.






















Query SS confidence 





















.
























































Query Sequence  FSHEYWMRHALTLAKRAWDERE. VPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTL
Query Conservation     
  
  

  
  
   
 . 






    

  
 
          


  

  
            


 

Alig confidence 





















.
























































Template Conservation 
     
  

  
      
   






  
 

  
 
          


  

  
        
   


 
 
Template Sequence  MNHETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSC
Template Known Secondary structure 

TTSSSS
TT

T
TT

TSSS
TT
Template Predicted Secondary structure 




























Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   85....90.........100.........110.........120.. .......130.........140.........150.......
Predicted Secondary structure 















...














Query SS confidence 





































. . .


































Query Sequence  EPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLH. . . HPGMNHRVEITEGILADECAALLSDFFRMRRQEIK
Query Conservation 


 

  

   

 




         
     
 ...         
  


  
   

  

   
    
Alig confidence 





































...


































Template Conservation 


 

  

  


  


          
                    
      
    
        
  
Template Sequence  EPCPMCLGAIYWARPKAVFYAAEHTDAAEAGFDDSFIYKEIDKPAEERTIPFYQVTLTEHLSPFQAWRNFANKKEY
Template Known Secondary structure 




S
TT
STS
GGGSSS






TTTT
TT



Template Predicted Secondary structure 




























Template SS confidence 











































































   81........90.........100.........110.........120.........130.........140.........150......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions