Return to main results Retrieve Phyre Job Id

Job DescriptionP68398
Confidence98.04%DateThu Jan 5 12:11:02 GMT 2012
Rank26Aligned Residues103
% Identity15%Templatec3r2nC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:cytidine deaminase; PDBTitle: crystal structure of cytidine deaminase from mycobacterium leprae
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20..... ....30.........40.........50.........60.........70.........80..
Predicted Secondary structure 


.























.
Query SS confidence 




















.
























































.
Query Sequence  EFSHEYWMRHALTLAKRAWDE. REVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYV.
Query Conservation      
  
  

  
  
   .
  






    

  
 
          


  

  
            


 .
Alig confidence 




















.









































.













.
Template Conservation 
 
   
   
  
   

 


 
 




    
 
  
 



 
     



 

  
 .  
      
 

  
Template Sequence  DVNWDTLQKAAVAARANSYAPYSNFPVGVAGFVNDGRLITGVNVENASYGLALCAECSMISALY. ATGGGRLVAVYCVDG
Template Known Secondary structure 


TT
B
TTT



TTS

B

SSGGG
B
.TT



T
Template Predicted Secondary structure 

























.






Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60...... ...70.........80.
 
   83......90.........100........
Predicted Secondary structure  ...








Query SS confidence  . . .

























Query Sequence  . . . TLEPCVMCAGAMIHSRIGRVVFGARD
Query Conservation  ...




 

  

   

 




   
Alig confidence  ...

























Template Conservation        


 


 
 

      
    
Template Sequence  NGDSLMPCGRCRQLLYEHGGPELKIMTPK
Template Known Secondary structure  TS
B




TT
TT
Template Predicted Secondary structure 













Template SS confidence 




























   82.......90.........100.........110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions