Job Description P68398 Confidence 98.15% Date Thu Jan 5 12:11:02 GMT 2012 Rank 24 Aligned Residues 117 % Identity 22% Template c3dmoD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:cytidine deaminase; PDBTitle: 1.6 a crystal structure of cytidine deaminase from2 burkholderia pseudomallei Resolution 1.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																							.																																																										.
Query SS confidence																							.																																																										.
Query Sequence		E	F	S	H	E	Y	W	M	R	H	A	L	T	L	A	K	R	A	W	D	E	.	R	E	V	P	V	G	A	V	L	V	H	N	N	R	V	I	G	E	G	W	N	R	P	I	G	R	H	D	P	T	A	H	A	E	I	M	A	L	R	Q	G	G	L	V	M	Q	N	Y	R	L	I	D	A	T	L	Y	V	.
Query Conservation																							.																																																										.
Alig confidence																							.																																																										.
Template Conservation
Template Sequence		H	M	T	H	H	A	L	I	E	A	A	K	A	A	R	E	K	A	Y	A	P	Y	S	N	F	K	V	G	A	A	L	V	T	N	D	G	K	V	F	H	G	C	N	V	E	N	A	S	Y	G	L	C	N	C	A	E	R	T	A	L	F	S	A	L	A	A	G	Y	R	P	G	E	F	A	A	I	A	V	V	G
Template Known Secondary structure		T															T	T		B		T	T	T											T	T	S								B			S	S	G	G	G		B													T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
						83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure		.	.	.	.																	.
Query SS confidence		.	.	.	.																	.
Query Sequence		.	.	.	.	T	L	E	P	C	V	M	C	A	G	A	M	I	H	S	R	.	I	G	R	V	V	F	G	A	R	D	A	K	T	G	A	A	G	S	L	M	D	V	L
Query Conservation		.	.	.	.																	.
Alig confidence		.	.	.	.																	.
Template Conservation
Template Sequence		E	T	H	G	P	I	A	P	C	G	A	C	R	Q	V	M	I	E	L	G	K	P	T	L	E	V	V	L	T	N	M	Q	G	D	V	R	V	T	S	A	G	D	L	L
Template Known Secondary structure		S		S	S	S																	T	T								T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions