 |
Job Description | P30131 | Confidence | 51.87% | Date | Thu Jan 5 11:45:52 GMT 2012 |
Rank | 117 | Aligned Residues | 86 |
% Identity | 19% | Template | d1m2ka_ |
SCOP info | DHS-like NAD/FAD-binding domain
| DHS-like NAD/FAD-binding domain
| Sir2 family of transcriptional regulators
|
Resolution | 1.47 |
|
 |
  |   |
131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  | . |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | T | H | C | G | P | R | F | T | I | I | R | A | M | P | Y | D | R | P | F | T | V | M | A | A | F | P | L | C | P | A | C | D | K | E | Y | R | D | P | L | D | R | R | F | H | A | Q | P | V | A | C | P | E | C | G | P | H | L | E | . |
W | V | S | H | G | E | H | A | E | Q | E | A | A | L | Q | A | A | I | A | Q |
Query Conservation |   |
|
|   |
|
|
|
|
|
|
|
|   |   |
|
|
|
|
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|   |   |
|
|   |
|
|   |   |
|
|
|
|
|
|
|   |
|
|   |   |
|
|
|   |
|   | . |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
C | T | S | C | N | N | S | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | V | E | S | A | P | K | I | P | P | L | P | K | C | D | K | C | G | S | L | L | R | P | G | V | V | W | A | G | E | M | L | P | P | D | V | L | D | R | A | M | R | E |
Template Known Secondary structure |   |
 | S | S | S | S |
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
| S | S |
|
|
| S | S | S |
|
| B |
| S | S | S | S | S | B |  |  |  |  |  |
|
| T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
124 | . | . | . | . | . | 130 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
  |
  |   |
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | M | G | K | I | V | A | I | K | G | I | G | G | F | H | L | A | C | D | A | R | N | S | N | A | V | A | T | L | R | A | R | K | H | R | P | A | K | P | L | A | V | M |
Query Conservation |   |
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |
|
|   |   |
|
|   |
|
|   |
|
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
V | E | R | A | D | V | I | I | V | A | G | T | S | . |
. |
. |
. |
. |
. |
. |
. |
A | V | V | Q | P | A | A | S | L | P | L | I | V | K | Q | R | G | G | A | I | I | E | I |
Template Known Secondary structure |   |
 |  |  |
| S |  |  |  |  |  | S |
|
| . | . | . | . | . | . | . | . | S |
| S | T | T | G | G | G |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
175 | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|