|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | T | S | C | G | V | Q | L | R | I | R | G | K | V | Q | G | V | G | F | R | P | F | V | W | Q | L | A | Q | Q | L | N | L | H | G | D | V | C | N | D | G | D | G | V | E | V | R | L | R | E | D | P | E | T | F | L | V | Q | L | Y | Q | H | C | P | P | L | A | R | I | D | S | V | E | R | E | P | F | I | W | S | Q |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |
|   |
|   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |
|   |
|   |   |
|
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
N | T | S | C | G | V | Q | L | R | I | R | G | K | V | Q | G | V | G | F | R | P | F | V | W | Q | L | A | Q | Q | L | N | L | H | G | D | V | C | N | D | G | D | G | V | E | V | R | L | R | E | D | P | E | V | F | L | V | Q | L | Y | Q | H | C | P | P | L | A | R | I | D | S | V | E | R | E | P | F | I | W | S | A |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
| S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
| S | S | S |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  | T |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | T | E | F | T | I | R |
Query Conservation |   |
  |   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
|
Template Sequence |   |
L | P | T | E | F | T | I | R |
Template Known Secondary structure |   |
|
| S | S |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . |
  |