Job Description P30131 Confidence 64.51% Date Thu Jan 5 11:45:52 GMT 2012 Rank 101 Aligned Residues 92 % Identity 13% Template c3jwpA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein sir2 homologue; PDBTitle: crystal structure of plasmodium falciparum sir2a (pf13_0152) in2 complex with amp Resolution 2.65 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		C	T	H	C	G	P	R	F	T	I	I	R	A	M	P	Y	D	R	P	F	T	V	M	A	A	F	P	L	C	P	A	C	D	K	E	Y	R	D	P	L	D	R	R	F	H	A	Q	P	V	A	C	P	E	C	G	P	H	L	E	.	W	V	S	H	G	E	H	A	E	Q	E	A	A	L	Q	A	A	I	A	Q
Query Conservation																																																													.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	C	T	C	N	K	I	V	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	I	X	L	Q	K	T	S	H	F	X	H	Q	L	P	P	E	C	P	C	G	G	I	F	K	P	N	I	I	L	F	G	E	V	V	S	S	D	L	L	K	E	A	E	E	E
Template Known Secondary structure			T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	T	T	S	S	T	T	T	S	S	S		B		T	T	S		B								B	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.																								.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	M	G	K	I	V	A	I	K	G	I	G	G	F	H	L	A	C	D	A	R	N	S	N	A	V	A	T	L	R	A	R	K	H	R	P	A	K	P	L	A	V	M
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.
Template Sequence		I	A	K	C	D	L	L	L	V	I	G	T	S	.	.	.	.	.	.	.	.	S	T	V	S	T	A	T	N	L	C	H	F	A	C	K	K	K	K	K	I	V	E	I
Template Known Secondary structure				T		S						S			.	.	.	.	.	.	.	.	S	S	S	S												T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.									.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions