 |
| Job Description | P30131 | | Confidence | 64.35% | Date | Thu Jan 5 11:45:52 GMT 2012 |
| Rank | 102 | Aligned Residues | 74 |
| % Identity | 18% | Template | c3htvA_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:d-allose kinase; |
PDBTitle: crystal structure of d-allose kinase (np_418508.1) from escherichia2 coli k12 at 1.95 a resolution
|
| Resolution | 1.95 Å |
|
| | |
670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | |
. | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | |
. | 720 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . |
| Predicted Secondary structure | |
 | | | | | | | | | | | | | | | | |
|
|
|
|  | | | |  |
| | | | | . | | | | | | | | | | | | |
|
|
|
|
| | . | |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
| | | | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
D | A | L | A | Q | G | F | A | A | L | M | R | E | Q | A | T | M | R | G | I | T | T | L | V | F | S | G | G | V | I | H | . |
N | R | L | L | R | A | R | L | A | H | Y | L | A | D | F | T | L | L | . |
F | P | Q | S | L | P | . |
. |
. |
. |
. |
. |
A | G | D | G | G | L | S | L | G | Q | G | V | I | A | A | A | R |
| Query Conservation | |
|
|
| | | |
| | | | | | | | | | | |
|
| | |
|
|
|
|
|
|
|
|
| . |
| | |
| | | |
| | | |
| |
| | |
| | . | | | | |
|
| . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
| |
|
| | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | | | |
| | | |
| | |
| | | | |
|
| | |
|
|
|
|
| |
| | | | | | | | | | |
| | | |
| | | | | | | | | | | | | | |
| | |
| | | | | | | | | |
|
|
| | |
| | | |
| Template Sequence | |
Q | S | L | L | E | N | A | A | R | A | I | A | T | S | I | N | L | F | D | P | D | A | V | I | L | G | G | G | V | X | D | X | P | A | F | P | R | E | T | L | V | A | X | T | Q | K | Y | L | R | R | P | L | P | H | Q | V | V | R | F | I | A | A | S | S | S | D | F | N | G | A | Q | G | A | A | I | L | A | H | Q | R |
| Template Known Secondary structure | |
| | | | | | | | | | | | | | | | | |
|
| S | | | | | |
| T | T | T | T | S | T | T |
|
| | | | | | | | | | | T | S |
| T | T | T | T | T | T | T |
| | | | |
|
|
|
| T | T | | | | | | | | | | | | | |
| Template Predicted Secondary structure | |
| | | | | | | | | | | | | | | | | |
|
|
| | | | | |
|
|
|
|
|
|
| | | | | | | | | | | | | | | | |
|
|
|
|
|
|
|
| | | | | |
|
|
|
| | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . |
| |
| | |
742 | . |
| Predicted Secondary structure | |
| |
| Query SS confidence | |
|
|
| Query Sequence | |
W | L |
| Query Conservation | |
|
|
| Alig confidence | |
|
|
| Template Conservation | |
|
|
| Template Sequence | |
F | L |
| Template Known Secondary structure | |
|
|
| Template Predicted Secondary structure | |
|
|
| Template SS confidence | |
|
|
| | |
300 | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
