Job Description P30131 Confidence 46.83% Date Thu Jan 5 11:45:52 GMT 2012 Rank 126 Aligned Residues 90 % Identity 17% Template c3gn5B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021); PDBTitle: structure of the e. coli protein mqsa (ygit/b3021) Resolution 2.15 Å

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		153	.	.	.	.	.	.	160	.	.	.	.													.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		M	A	A	F	P	L	C	P	A	C	D	K	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	R	D	P	L	D	R	R	F	H	A	Q	P	V	A	.	C	P	E	C	G	P	H	L	E	W	V	S	H	G	E	H	A	E	Q	E	A	A	L	Q	A	A	I	A	Q	L	K	M	G	K	I	V	A	I	K
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence				.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.					.												.						.	.																									.					.	.	.
Template Conservation				.	.	.	.																							.																		.	.																									.					.	.	.
Template Sequence		M	K	.	.	.	.	C	P	V	C	H	Q	G	E	M	V	S	G	I	K	D	I	P	Y	T	F	R	G	.	R	K	T	V	L	K	G	I	H	G	L	Y	C	V	H	C	E	.	.	E	S	I	M	N	K	E	E	S	D	A	F	M	A	Q	V	K	A	F	R	A	S	V	N	.	A	E	T	V	.	.	.
Template Known Secondary structure			B	.	.	.	.		T	T	T	S	S	S	B													T	T	.														T	T	T		.	.																									.		T	S		.	.	.
Template Predicted Secondary structure				.	.	.	.																							.																		.	.																									.					.	.	.
Template SS confidence
		1	.					.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		G	I	G	G	F	H	L	A	C	D	A	R	N	S	N	A	V	A	T	L	R	A	R	K	H	R	P	A	K	P	L	A	V	M	L	P	.	V	A	D	G	L	P	D	A	A	R
Query Conservation																																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	P	E	F	I	V	K	V	R	K	K	L	S	L	T	Q	K	E	A	S	E	I	F	G	G	G	V	N	A	F	S	R	Y	E	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.												T	T												S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions